LOCUS BC105108 1454 bp mRNA linear HUM 19-JAN-2006
DEFINITION Homo sapiens GATA binding protein 4, mRNA (cDNA clone MGC:132768
IMAGE:8144111), complete cds.
ACCESSION BC105108
VERSION BC105108.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1454)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1454)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (13-SEP-2005) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Mike Brownstein, NIMH
cDNA Library Preparation: British Columbia Cancer Research Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRCB Plate: 3 Row: o Column: 21.
FEATURES Location/Qualifiers
source 1..1454
/db_xref="H-InvDB:HIT000338196"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:132768 IMAGE:8144111"
/tissue_type="Lung and heart, PCR rescued clones"
/clone_lib="NIH_MGC_315"
/note="Vector: pCR4-TOPO with reversed insert; Clone
identification sequence tag: CGCGGCCA"
gene 1..1454
/gene="GATA4"
/db_xref="GeneID:2626"
/db_xref="HGNC:HGNC:4173"
/db_xref="IMGT/GENE-DB:4173"
/db_xref="MIM:600576"
CDS 79..1407
/gene="GATA4"
/codon_start=1
/product="GATA binding protein 4"
/protein_id="AAI05109.1"
/db_xref="GeneID:2626"
/db_xref="HGNC:HGNC:4173"
/db_xref="IMGT/GENE-DB:4173"
/db_xref="MIM:600576"
/translation="MYQSLAMAANHGPPPGAYEAGGPGAFMHGAGAASSPVYVPTPRV
PSSVLGLSYLQGGGAGSASGGASGGSSGGAASGAGPGTQQGSPGWSQAGADGAAYTPP
PVSPRFSFPGTTGSLAAAAAAAAAREAAAYSSGGGAAGAGLAGREQYGRAGFAGSYSS
PYPAYMADVGASWAAAAAASAGPFDSPVLHSLPGRANPAARHPNLDMFDDFSEGRECV
NCGAMSTPLWRRDGTGHYLCNACGLYHKMNGINRPLIKPQRRLSASRRVGLSCANCQT
TTTTLWRRNAEGEPVCNACGLYMKLHGVPRPLAMRKEGIQTRKRKPKNLNKSKTPAAP
SGSESLPPASGASSNSSNATTSSSEEMRPIKTEPGLSSHYGHSSSVSQTFSVSAMSGH
GPSIHPVLSALKLSPQGYASPVSQSPQTSSKQDSWNSLVLADSHGDIITA"
BASE COUNT 237 a 543 c 450 g 224 t
ORIGIN
1 cgtcgttttc tctccccgcg tggctccttg acctgcgagg gagagagagg acaccgaagc
61 cgggagctcg cagggaccat gtatcagagc ttggccatgg ccgccaacca cgggccgccc
121 cccggtgcct acgaggcggg cggccccggc gccttcatgc acggcgcggg cgccgcgtcc
181 tcgccagtct acgtgcccac accgcgggtg ccctcctccg tgctgggcct gtcctacctc
241 cagggcggag gcgcgggctc tgcgtccgga ggcgcctcgg gcggcagctc cggtggggcc
301 gcgtctggtg cggggcccgg gacccagcag ggcagcccgg gatggagcca ggcgggagcc
361 gacggagccg cttacacccc gccgccggtg tcgccgcgct tctccttccc ggggaccacc
421 gggtccctgg cggccgccgc cgccgctgcc gcggcccggg aagctgcggc ctacagcagt
481 ggcggcggag cggcgggtgc gggcctggcg ggccgcgagc agtacgggcg cgccggcttc
541 gcgggctcct actccagccc ctacccggct tacatggccg acgtgggcgc gtcctgggcc
601 gcagccgccg ccgcctccgc cggccccttc gacagcccgg tcctgcacag cctgcccggc
661 cgggccaacc cggccgcccg acaccccaat ctcgatatgt ttgacgactt ctcagaaggc
721 agagagtgtg tcaactgtgg ggctatgtcc accccgctct ggaggcgaga tgggacgggt
781 cactatctgt gcaacgcctg cggcctctac cacaagatga acggcatcaa ccggccgctc
841 atcaagcctc agcgccggct gtccgcctcc cgccgagtgg gcctctcctg tgccaactgc
901 cagaccacca ccaccacgct gtggcgccgc aatgcggagg gcgagcctgt gtgcaatgcc
961 tgcggcctct acatgaagct ccacggggtc cccaggcctc ttgcaatgcg gaaagagggg
1021 atccaaacca gaaaacggaa gcccaagaac ctgaataaat ctaagacacc agcagctcct
1081 tcaggcagtg agagccttcc tcccgccagc ggtgcttcca gcaactccag caacgccacc
1141 accagcagca gcgaggagat gcgtcccatc aagacggagc ctggcctgtc atctcactac
1201 gggcacagca gctccgtgtc ccagacgttc tcagtcagtg cgatgtctgg ccatgggccc
1261 tccatccacc ctgtcctctc ggccctgaag ctctccccac aaggctatgc gtctcccgtc
1321 agccagtctc cacagaccag ctccaagcag gactcttgga acagcctggt cttggccgac
1381 agtcacgggg acataatcac tgcgtaatct tccctcttcc ctcctcaaat tcctgcacgg
1441 acctgggact tgga
//