LOCUS BC105089 2692 bp mRNA linear HUM 18-MAR-2009
DEFINITION Homo sapiens ArfGAP with RhoGAP domain, ankyrin repeat and PH
domain 2, mRNA (cDNA clone IMAGE:8144092), partial cds.
ACCESSION BC105089
VERSION BC105089.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2692)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2692)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (13-SEP-2005) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Mike Brownstein
cDNA Library Preparation: British Columbia Cancer Research Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRCB Plate: 3 Row: o Column: 2.
FEATURES Location/Qualifiers
source 1..2692
/db_xref="H-InvDB:HIT000338177"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:8144092"
/tissue_type="Cerebellum, Uterus, Testis, PCR rescued
clones"
/clone_lib="NIH_MGC_337"
/lab_host="DH10B"
/note="Vector: pCR4-TOPO; Clone identification sequence
tag: TTTCACTC"
gene <1..2692
/gene="ARAP2"
/gene_synonym="PARX"
/db_xref="GeneID:116984"
/db_xref="HGNC:HGNC:16924"
/db_xref="MIM:606645"
CDS <1..2667
/gene="ARAP2"
/gene_synonym="PARX"
/codon_start=1
/product="ARAP2 protein"
/protein_id="AAI05090.1"
/db_xref="GeneID:116984"
/db_xref="HGNC:HGNC:16924"
/db_xref="MIM:606645"
/translation="CAAVVKPDVLETMALLFSGADVMCATGDPVHSTPYLLAKKAGQS
LQMEFLYHNKFSDFPQHDIHSEGVLSQESSQSTFLCDFLYQAPSAASKLSSEKKLLEE
TNKKWCVLEGGFLSYYENDKSTTPNGTININEVICLAIHKEDFYLNTGPIFIFEIYLP
SERVFLFGAETSQAQRKWTEAIAKHFVPLFAENLTEADYDLIGQLFYKDCHALDQWRK
GWFAMDKSSLHFCLQMQEVQGDRMHLRRLQELTISTMVQNGEKLDVLLLVEKGRTLYI
HGHTKLDFTVWHTAIEKAAGTDGNALQDQQLSKNDVPIIVNSCIAFVTQYGLGCKYIY
QKNGDPLHISELLESFKKDARSFKLRAGKHQLEDVTAVLKSFLSDIDDALLTKELYPY
WISALDTQDDKERIKKYGAFIRSLPGVNRATLAAIIEHLYRVQKCSEINHMNAHNLAL
VFSSCLFQTKGQTSEEVNVIEDLINNYVEIFEVKEDQVKQMDIENSFITKWKDTQVSQ
AGDLLIEVYVERKEPDCSIIIRISPVMEAEELTNDILAIKNIIPTKGDIWATFEVIEN
EELERPLHYKENVLEQVLRWSSLAEPGSAYLVVKRFLTADTIKHCSDRSTLGSIKEGI
LKIKEEPSKILSGNKFQDRYFVLRDGFLFLYKDVKSSKHDKMFSLSSMKFYRGVKKKM
KPPTSWGLTAYSEKHHWHLCCDSSQTQTEWMTSIFIAQHEYDIWPPAGKERKRSITKN
PKIGGLPLIPIQHEGNATLARKNIESARAELERLRLSEKCDKESVDSSLKERASMVAH
CLEHKDDKLRNRPRKHRSFNCLEDTEPEAPLGQPKGHKGLKTLRKTEDRNSKATLDSD
HKLPSRVIEELNVVLQRSRTLPKELQDEQILK"
BASE COUNT 891 a 504 c 591 g 706 t
ORIGIN
1 tgtgctgctg tagtgaaacc ggatgttcta gaaacaatgg ctttgctgtt cagtggagca
61 gatgtcatgt gtgccaccgg agaccccgtg catagcaccc cctatctgct agccaagaaa
121 gctgggcaaa gtctgcaaat ggaatttctc taccataaca aattctcaga tttccctcaa
181 catgatattc attccgaggg tgtattaagt caagagtctt cccagtccac attcctctgt
241 gactttttat atcaagctcc ttctgctgct tctaaactct cttcagagaa aaaactgctt
301 gaagagacaa ataaaaaatg gtgtgttttg gaaggaggct tcttgagtta ctatgaaaat
361 gataagtcta ccacacctaa tggcaccatt aatatcaatg aagttatctg cctggctata
421 cacaaagagg acttctattt aaatactggg cccatcttta tctttgagat ctacttaccc
481 tccgaacgtg tgtttttatt tggagctgaa acatctcaag ctcaaagaaa atggacagag
541 gcaatagcca agcattttgt tcccttattt gctgaaaact taacagaagc tgactatgat
601 ttgattggtc aactcttcta caaagactgc catgccctgg atcagtggag aaaaggctgg
661 tttgctatgg acaaatccag cttgcatttt tgccttcaaa tgcaagaagt tcagggagat
721 agaatgcact taagaagact gcaagagcta acaatcagca caatggttca aaatggggaa
781 aaactggatg ttttactctt ggtagaaaaa gggagaacat tatacatcca tgggcatacc
841 aagttggatt tcacagtctg gcatactgca attgaaaaag cagcaggtac agatggtaat
901 gctttacaag atcagcagct cagcaaaaat gacgttccca ttatagtgaa cagctgtata
961 gcatttgtta cacagtatgg tttaggatgc aaatatatct atcaaaagaa tggtgatcct
1021 ttgcatataa gtgaactcct ggagagtttc aaaaaggatg caagaagctt taaattgagg
1081 gctggaaaac atcagcttga agatgtgacg gctgtgttga aaagttttct ctctgacatt
1141 gatgatgcac tgcttactaa ggagctctac ccatattgga tctctgcttt agatacgcaa
1201 gatgacaagg aaagaattaa aaaatatgga gcatttatac gttctcttcc aggggtcaac
1261 cgagcaacac tagcagctat cattgaacac ctgtataggg ttcagaaatg ctcagaaatc
1321 aatcacatga atgcccataa tttggccttg gtcttttcat cctgtttgtt tcaaacgaag
1381 ggacaaacta gtgaagaagt gaatgtaatt gaggacctaa ttaataatta tgtagaaata
1441 tttgaggtta aagaagatca agtcaaacaa atggacatag aaaatagctt tattaccaag
1501 tggaaagaca cccaagtttc ccaggctgga gatttgttaa ttgaagtata tgtagaaagg
1561 aaggaacccg actgtagtat tataattcgg atatctcctg tgatggaagc agaagaatta
1621 actaatgata tattagcgat aaaaaatatt attcctacaa aaggtgatat ttgggccaca
1681 tttgaagtca ttgaaaatga agagctagag cgtcctcttc actacaagga aaatgtactg
1741 gagcaggtgc ttcggtggag ttcattagct gaacctggct ctgcttacct ggtggtgaag
1801 agattcttaa ccgctgacac aattaaacac tgcagtgacc ggagtacact gggaagcatc
1861 aaagaaggaa tcttgaaaat caaagaagaa ccatccaaaa tactatctgg aaataagttt
1921 caagaccggt attttgtttt acgagatggg tttctctttc tttacaagga tgtgaagagt
1981 agtaaacatg acaagatgtt ttctctcagt tccatgaagt tttatcgtgg agtgaaaaag
2041 aaaatgaagc ctccaacaag ctggggattg accgcatatt ctgagaaaca tcactggcac
2101 ctgtgttgtg atagttcaca aactcagacg gagtggatga ccagtatctt tattgcccag
2161 catgaatatg atatatggcc accagctgga aaggaacgaa aacgttcaat aaccaaaaat
2221 cccaaaattg gaggtttgcc tctgattcct atacagcatg aggggaatgc aaccttggcc
2281 cggaaaaata ttgagagtgc aagagcagaa cttgaaaggc tgcggctcag tgaaaagtgt
2341 gataaagagt ccgtggactc tagcttaaag gagagagctt ccatggtggc ccactgcctg
2401 gagcacaagg acgataaact tcgaaatcga ccccgaaaac atcggagttt caactgcctg
2461 gaggacacag agcctgaagc cccacttggg caaccaaaag gccataaagg cctaaagaca
2521 ttgaggaaga ctgaggacag gaatagcaaa gctactttgg actctgatca taagttacca
2581 tcaagggtaa ttgaagaact taatgtggtt ctacaacggt caagaaccct tccaaaagaa
2641 ttacaggatg agcagatttt gaagtaggaa ataaaatgaa ttgctcccca aa
//