LOCUS BC105088 3116 bp mRNA linear HUM 22-DEC-2006 DEFINITION Homo sapiens immunoglobulin mu binding protein 2, mRNA (cDNA clone MGC:132748 IMAGE:8144091), complete cds. ACCESSION BC105088 VERSION BC105088.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 3116) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 3116) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (13-SEP-2005) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Mike Brownstein, NIMH cDNA Library Preparation: British Columbia Cancer Research Center cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRCB Plate: 3 Row: o Column: 1. FEATURES Location/Qualifiers source 1..3116 /db_xref="H-InvDB:HIT000338176" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:132748 IMAGE:8144091" /tissue_type="Brain, cerebellum, PCR rescued clones" /clone_lib="NIH_MGC_310" /note="Vector: pCR4-TOPO; Clone identification sequence tag: TATGTCGC" gene 1..3116 /gene="IGHMBP2" /gene_synonym="CATF1" /gene_synonym="HCSA" /gene_synonym="SMARD1" /gene_synonym="SMUBP2" /db_xref="GeneID:3508" /db_xref="HGNC:HGNC:5542" /db_xref="IMGT/GENE-DB:IGHMBP2" /db_xref="MIM:600502" CDS 40..3021 /gene="IGHMBP2" /gene_synonym="CATF1" /gene_synonym="HCSA" /gene_synonym="SMARD1" /gene_synonym="SMUBP2" /codon_start=1 /product="immunoglobulin mu binding protein 2" /protein_id="AAI05089.1" /db_xref="GeneID:3508" /db_xref="HGNC:HGNC:5542" /db_xref="IMGT/GENE-DB:IGHMBP2" /db_xref="MIM:600502" /translation="MASAAVESFVTKQLDLLELERDAEVEERRSWQENISLKELQSRG VCLLKLQVSSQRTGLYGRLLVTFEPRRYGSAAALPSNSFTSGDIVGLYDAANEGSQLA TGILTRVTQKSVTVAFDESHDFQLSLDRENSYRLLKLANDVTYRRLKKALIALKKYHS GPASSLIEVLFGRSAPSPASEIHPLTFFNTCLDTSQKEAVSFALSQKELAIIHGPPGT GKTTTVVEIILQAVKQGLKVLCCAPSNIAVDNLVERLALCKQRILRLGHPARLLESIQ QHSLDAVLARSDSAQIVADIRKDIDQVFVKNKKTQDKREKSNFRNEIKLLRKELKERE EAAMLESLTSANVVLATNTGASADGPLKLLPESYFDVVVIDECAQALEASCWIPLLKA RKCILAGDHKQLPPTTVSHKAALAGLSLSLMERLAEEYGARVVRTLTVQYRMHQAIMR WASDTMYLGQLTAHSSVARHLLRDLPGVAATEETGVPLLLVDTAGCGLFELEEEDEQS KGNPGEVRLVSLHIQALVDAGVPARDIAVVSPYNLQVDLLRQSLVHRHPELEIKSVDG FQGREKEAVILSFVRSNRKGEVGFLAEDRRINVAVTRARRHVAVICDSRTVNNHAFLK TLVEYFTQHGEVRTAFEYLDDIVPENYSHENSQGSSHAATKPQGPAASTRTGSQRQEG GQEAAAPARQGRKKPAGKSLASEAPSQPSLNGGSPEGVESQDGVDHFRAMIVEFMASK KMQLEFPPSLNSHDRLRVHQIAEEHGLRHDSSGEGKRRFITVSKRAPRPRAALGPPAG TGGPAPLQPVPPTPAQTEQPPREQRGPDQPDLRTLHLERLQRVRSAQGQPASKEQQAS GQQKLPEKKKKKAKGHPATDLPTEEDFEALVSAAVKADNTCGFAKCTAGVTTLGQFCQ LCSRRYCLSHHLPEIHGCGERARAHARQRISREGVLYAGSGTKNGSLDPAKRAQLQRR LDKKLSELSNQRTSRRKERGT" BASE COUNT 704 a 914 c 947 g 551 t ORIGIN 1 cgggacgtcg gcttctaggg gcccaggccg gcggcggcga tggcctcggc agctgtggag 61 agcttcgtga ccaagcaact ggacctgctg gagctcgaga gagacgcgga ggtggaggag 121 cgcaggtcct ggcaggagaa catctctctg aaagagctcc agagccgagg cgtgtgtttg 181 ctgaagctgc aggtatccag ccagcgcact gggctgtacg gacggctgct ggtcaccttt 241 gagcccaggc gatacgggtc cgcggcagct cttcccagta acagctttac ttctggtgat 301 atcgtgggcc tgtacgatgc tgctaatgag ggcagtcagc tggccactgg gatcttgacc 361 cgggtcaccc agaagtcggt cacggtggcc tttgatgagt cccacgattt ccagttgagc 421 ttggaccgag agaattccta cagactgtta aaacttgcca atgatgtcac ttacaggcga 481 ctgaaaaaag ccctgattgc tctaaagaag tatcattctg gcccagcctc ctcactcata 541 gaagtgctct ttggcagatc tgctcccagt cctgccagtg aaatacaccc gctgacattc 601 ttcaacacct gcctggacac ctcccagaaa gaagcggttt catttgcgct gtctcagaaa 661 gaacttgcca tcatccatgg acctcctggc actgggaaaa ccacgactgt ggttgagatc 721 attcttcaag ctgtgaaaca aggcttaaag gttctgtgct gcgccccctc caacatcgcc 781 gtggacaatc tggtggagcg cctggctctg tgtaagcagc ggattctgcg cctgggacac 841 cctgcccgcc tcctggagtc cattcagcag cactccctgg atgcggtttt agcgcggagc 901 gacagtgccc agattgttgc agatatcagg aaggacatcg accaggtctt tgtgaaaaac 961 aaaaagaccc aggataagag agagaaaagt aattttcgaa atgaaattaa gctgttaaga 1021 aaagaactga aggagaggga agaagcagct atgctcgaga gcctcacttc ggcaaacgtg 1081 gtccttgcaa caaacacagg tgcgtctgcc gatggccccc tgaagttgct gcccgagagc 1141 tacttcgacg tggtggtcat tgacgagtgt gcccaggccc tcgaggcgag ctgctggatc 1201 cccctgctga aggccagaaa gtgcatcctg gcgggcgatc acaagcagct gccccccacc 1261 acagtctctc acaaggctgc gctggcagga ctgtcactca gcctgatgga acgcctggct 1321 gaggagtacg gcgcgagggt ggtgcggaca ctgacggtgc agtaccgcat gcaccaggct 1381 atcatgcgct gggcctcaga caccatgtac cttgggcagc tcacagccca ctcttccgtg 1441 gcaaggcacc tcctgaggga cctcccaggt gtggctgcca cagaagagac gggtgtgccc 1501 ctgctcttgg tggacaccgc cggctgcggg ctgtttgagc tggaggagga ggacgaacag 1561 tcgaaaggga accctggcga agtccgcctc gtcagtttgc acatccaggc tctggtggac 1621 gctggtgttc cagcccgtga cattgctgtg gtctcgccat acaacctcca ggtggacctg 1681 ctcagacaga gccttgtgca caggcaccct gagcttgaaa tcaagtctgt cgatggcttc 1741 caaggccgag agaaggaggc cgtgatactg tccttcgtca gatccaacag gaaaggtgaa 1801 gttggttttc ttgctgagga ccggaggatc aacgtggctg tcacccgtgc ccgacgccac 1861 gtggcggtca tctgtgactc ccgtactgtc aacaaccatg catttttgaa gaccctggtg 1921 gagtatttca cacagcatgg ggaagtacgc acggcctttg agtatcttga cgatattgtc 1981 ccagaaaact attcccatga gaactcccag ggttccagcc acgctgccac caagccccag 2041 ggacctgctg cgtccaccag gaccggaagc cagcggcagg agggaggcca ggaggctgca 2101 gcacctgcca gacagggccg gaagaagccg gctgggaagt ctctggcctc tgaagctcca 2161 tctcagccca gcctcaacgg aggcagccca gagggagtgg agagccaaga tggcgtggac 2221 cacttccggg ccatgatagt ggagttcatg gccagcaaga agatgcagtt ggagtttcct 2281 ccttccctca attcccacga caggctgcgg gtccaccaaa tagccgagga gcacgggctg 2341 aggcacgaca gttctgggga agggaagagg aggttcatca ctgtgagcaa gagggccccg 2401 cgaccccgag cagccctggg acccccagca gggaccggtg gcccagcccc tctccagcca 2461 gtgcccccta cccctgcgca gacagagcag cctcccaggg agcagcgtgg cccagaccag 2521 cctgatctga ggacgctgca cctggagaga ctgcagaggg tcaggagcgc gcaggggcag 2581 cccgccagca aggagcagca ggcctcaggg cagcagaaac ttccagaaaa gaaaaagaaa 2641 aaagccaaag gacatccggc cacagatctg cccacggagg aggactttga ggccctggtt 2701 tctgccgccg ttaaggctga taacacctgc ggctttgcca agtgcacagc cggcgtcaca 2761 accctgggcc agttctgcca gctctgcagc cgccgctact gcctcagcca ccacctgccc 2821 gagatccatg gctgcggtga gagggctcgc gcccatgccc ggcagagaat cagccgggaa 2881 ggggtcctct atgccggcag cgggaccaag aacggatccc tggacccagc caagagggcc 2941 cagctgcaga ggaggctgga taagaagctg agtgagctca gcaaccagag gaccagccgg 3001 aggaaggaga gggggacgtg accggccgca tccttgcacg ccccgcggag ctctctccat 3061 ggtagcccag ggcgctggca gaccatgctc cgcctccacc agggccacag aggagc //