LOCUS BC105054 2392 bp mRNA linear HUM 21-JUL-2006
DEFINITION Homo sapiens family with sequence similarity 5, member C, mRNA
(cDNA clone MGC:132714 IMAGE:8144057), complete cds.
ACCESSION BC105054
VERSION BC105054.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2392)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2392)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (13-SEP-2005) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Mike Brownstein, NIMH
cDNA Library Preparation: British Columbia Cancer Research Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRCB Plate: 3 Row: m Column: 15.
FEATURES Location/Qualifiers
source 1..2392
/db_xref="H-InvDB:HIT000338142"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:132714 IMAGE:8144057"
/tissue_type="Brain, cerebellum, PCR rescued clones"
/clone_lib="NIH_MGC_310"
/note="Vector: pCR4-TOPO; Clone identification sequence
tag: GACCGCGG"
gene 1..2392
/gene="FAM5C"
/gene_synonym="DBCCR1L"
/gene_synonym="DBCCR1L1"
/gene_synonym="RP11-445K1.1"
/db_xref="GeneID:339479"
/db_xref="HGNC:HGNC:22393"
CDS 57..2357
/gene="FAM5C"
/gene_synonym="DBCCR1L"
/gene_synonym="DBCCR1L1"
/gene_synonym="RP11-445K1.1"
/codon_start=1
/product="family with sequence similarity 5, member C"
/protein_id="AAI05055.1"
/db_xref="GeneID:339479"
/db_xref="HGNC:HGNC:22393"
/translation="MIWRSRAGAELFSLMALWEWIALSLHCWVLAVAAVSDQHATSPF
DWLLSDKGPFHRSQEYTDFVDRSRQGFSTRYKIYREFGRWKVNNLAVERRNFLGSPLP
LAPEFFRNIRLLGRRPTLQQITENLIKKYGTHFLLSATLGGEESLTIFVDKRKLSKRA
EGSDSTTNSSSVTLETLHQLAASYFIDRDSTLRRLHHIQIASTAIKVTETRTGPLGCS
NYDNLDSVSSVLVQSPENKIQLQGLQVLLPDYLQERFVQAALSYIACNSEGEFICKEN
DCWCHCGPKFPECNCPSMDIQAMEENLLRITETWKAYNSDFEESDEFKLFMKRLPMNY
FLNTSTIMHLWTMDSNFQRRYEQLENSMKQLFLKAQKIVHKLFSLSKRCHKQPLISLP
RQRTSTYWLTRIQSFLYCNENGLLGSFSEETHSCTCPNDQVVCTAFLPCTVGDASACL
TCAPDNRTRCGTCNTGYMLSQGLCKPEVAESTDHYIGFETDLQDLEMKYLLQKTDRRI
EVHAIFISNDMRLNSWFDPSWRKRMLLTLKSNKYKSSLVHMILGLSLQICLTKNSTLE
PVLAVYVNPFGGSHSESWFMPVNENSFPDWERTKLDLPLQCYNWTLTLGNKWKTFFET
VHIYLRSRIKSNGPNGNESIYYEPLEFIDPSRNLGYMKINNIQVFGYSMHFDPEAIRD
LILQLDYPYTQGSQDSALLQLLEIRDRVNKLSPPGQRRLDLFSCLLRHRLKLSTSEVV
RIQSALQAFNAKLPNTMDYDTTKLCS"
BASE COUNT 660 a 584 c 532 g 616 t
ORIGIN
1 cctctggtgt tgagggaaag ctgagagaat gaaggctcta aatccccagt ggaagcatga
61 tatggcgaag cagagctggt gctgaattgt tctctctgat ggctctatgg gagtggatag
121 cactgagtct tcattgctgg gttttagcgg ttgctgctgt ttcggatcag catgccacaa
181 gccccttcga ctggctcctc tctgataagg gacccttcca tcgctcacag gaatacacag
241 attttgtgga cagaagccgg cagggattta gcacaagata caagatatac agggagtttg
301 gccgctggaa agtaaataac cttgcagttg agagaagaaa tttccttggc tctcctctgc
361 ctcttgcccc tgaattcttc cgcaacataa gacttttggg acgtcgacct acccttcagc
421 aaatcacaga aaaccttatc aagaaatatg ggacacattt cttgctatct gctactctgg
481 gaggagagga gtcactcaca atttttgtgg acaagcggaa gttgagcaaa cgagctgaag
541 gaagtgattc caccaccaat agctcttcgg tcactctgga gacgctacat cagctagccg
601 cttcttattt cattgacagg gacagcaccc ttcggagact tcaccacatt caaattgcat
661 ccactgccat aaaggtaaca gaaacacgga ctggtcctct tggctgcagt aactatgaca
721 acctagattc tgtcagttct gttctggttc agagtcctga gaataagatt cagttgcaag
781 ggcttcaagt acttctccca gactatcttc aggaacgttt tgtacaagca gctttgagct
841 acattgcttg caattcagag ggagagttta tctgcaagga aaatgactgc tggtgtcact
901 gtggtcccaa atttccagaa tgcaactgcc cctccatgga cattcaagcc atggaagaga
961 atcttcttcg aataactgaa acctggaaag cttacaacag tgactttgag gaatcagatg
1021 aattcaagtt atttatgaaa aggctaccta tgaattattt cctcaacaca tctactataa
1081 tgcatttgtg gacaatggat tctaattttc agcgccgtta tgaacaactg gagaacagca
1141 tgaaacaact tttcctaaag gcgcagaaaa ttgtacacaa gctttttagc cttagcaaga
1201 ggtgtcataa acaacccctc atcagcctgc caagacaaag aacctcaacc tactggctta
1261 ctcgcatcca gtcttttctc tactgcaatg agaacggcct cctaggcagc ttttcagaag
1321 agacgcactc gtgcacgtgt ccgaatgacc aggtggtctg caccgcgttc ctgccctgca
1381 cagtgggaga cgcctctgcc tgcctgacat gcgcaccaga caaccgcacc cgctgcggca
1441 cctgcaacac cggctacatg ctcagccagg ggctctgcaa gcctgaagtc gccgagtcca
1501 ccgatcacta tattggcttt gaaactgacc tgcaagatct cgagatgaaa tatctgctgc
1561 agaaaacgga cagacgaata gaagtccatg ccatttttat cagcaatgac atgcgcctca
1621 atagctggtt tgatccctcc tggcgtaagc ggatgctcct caccttgaag agcaataagt
1681 acaagtcaag tctggtccat atgattttgg gtctctcttt acagatttgc ttaactaaaa
1741 acagcacctt ggagccagtg ttggctgttt atgtcaatcc cttcggaggc agccactctg
1801 agagctggtt tatgcctgtg aatgaaaaca gctttccaga ctgggagcgg actaagttgg
1861 acctacccct gcagtgttat aactggacat taactctggg gaacaaatgg aagacatttt
1921 ttgagacagt acacatctac ctgagaagtc gcatcaagtc caatggtccc aatggtaatg
1981 agagcattta ctatgaacct ctggagttta ttgacccttc ccggaacctg ggctatatga
2041 aaatcaataa cattcaagtg tttggctaca gcatgcactt tgaccctgaa gcaattcggg
2101 acctgatttt gcagctggac tacccctata ctcagggatc ccaggattca gcacttttgc
2161 aactactaga gatcagagac cgtgtaaata aactctcccc acctggtcag cgtcgtctag
2221 atcttttctc ttgcttgctt cgtcatagac tcaagctgtc tactagtgag gtggtgagga
2281 tccaatctgc tctgcaggcg tttaatgcca aattgccaaa cacaatggat tatgacacga
2341 ccaaattatg tagttaacca taaatgtcaa gcacaaccca aaatcttgaa gg
//