LOCUS BC105044 1767 bp mRNA linear HUM 21-JUL-2006
DEFINITION Homo sapiens coiled-coil domain containing 55, mRNA (cDNA clone
MGC:132704 IMAGE:8144047), complete cds.
ACCESSION BC105044
VERSION BC105044.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1767)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1767)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (13-SEP-2005) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Mike Brownstein, NIMH
cDNA Library Preparation: British Columbia Cancer Research Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRCB Plate: 3 Row: m Column: 5.
FEATURES Location/Qualifiers
source 1..1767
/db_xref="H-InvDB:HIT000338132"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:132704 IMAGE:8144047"
/tissue_type="Brain, cerebellum, PCR rescued clones"
/clone_lib="NIH_MGC_311"
/note="Vector: pCR4-TOPO with reversed insert; Clone
identification sequence tag: GAGGGGTT"
gene 1..1767
/gene="CCDC55"
/gene_synonym="DKFZP434K1421"
/gene_synonym="HSPC095"
/db_xref="GeneID:84081"
/db_xref="HGNC:HGNC:25305"
CDS 25..1701
/gene="CCDC55"
/gene_synonym="DKFZP434K1421"
/gene_synonym="HSPC095"
/codon_start=1
/product="coiled-coil domain containing 55"
/protein_id="AAI05045.1"
/db_xref="GeneID:84081"
/db_xref="HGNC:HGNC:25305"
/translation="MAIPGRQYGLILPKKTQQLHPVLQKPSVFGNDSDDDDETSVSES
LQREAAKKQAMKQTKLEIQKALAEDATVYEYDSIYDEMQKKKEENNPKLLLGKDRKPK
YIHNLLKAVEIRKKEQEKRMEKKIQREREMEKGEFDDKEAFVTSAYKKKLQERAEEEE
REKRAAALEACLDVTKQKDLSGFYRHLLNQAVGEEEVPKCSFREARSGIKEEKSRGFS
NEVSSKNRIPQEKCILQTDVKVEENPDADSDFDAKSSADDEIEETRVNCRREKVIETP
ENDFKHHRSQNHSRSPSEERGHSTRHHTKGSRTSRGHEKREDQHQQKQSRDQENHYTD
RDYRKERDSHRHREASHRDSHWKRHEQEDKPRARDQRERSDRVWKREKDREKYSQREQ
ERDRQQNDQNRPSEKGEKEEKSKAKEEHMKVRKERYENNDKYRDREKREVGVQSSERN
QDRKESSPNSRAKDKFLDQERSNKMRNMAKDKERNQEKPSNSESSLGAKHRLTEEGQE
KGKEQERPPEAVSKFAKRNNEETVMSARDRYLARQMARVNAKTYIEKEDD"
BASE COUNT 729 a 286 c 464 g 288 t
ORIGIN
1 acgttcagcg gacacgggag caagatggcg attccgggca ggcagtatgg gcttattttg
61 ccaaagaaaa cacagcagtt gcaccctgtt ttgcaaaaac catcagtgtt tgggaatgat
121 tctgatgatg atgatgagac ctctgtgagt gaaagccttc agagggaagc tgctaagaag
181 caggccatga aacagaccaa actggaaatc cagaaggccc ttgcagaaga tgctactgtg
241 tatgaatatg acagtattta tgatgaaatg cagaaaaaaa aggaggaaaa taatcccaaa
301 ttgcttttgg ggaaagacag aaagcccaag tatattcaca acttgctaaa agcagttgag
361 atcagaaaaa aggaacagga aaaaagaatg gaaaagaaaa tacagagaga acgagaaatg
421 gaaaaggggg agtttgatga taaagaagca tttgtgacat ctgcatataa gaaaaaactg
481 caagagagag ctgaagaaga agaaagagaa aagagggctg ctgcactgga agcatgtttg
541 gatgtaacca agcagaaaga tctcagtgga ttttataggc acctattaaa tcaagcagtt
601 ggtgaagagg aagtacctaa atgcagcttt cgtgaagcca gatctggtat aaaggaagaa
661 aaatcaaggg gcttctccaa tgaagtaagt tcaaaaaaca gaataccaca agagaaatgc
721 attcttcaaa ctgatgtgaa agtagaggaa aacccagatg cagacagtga cttcgatgct
781 aagagcagtg cggatgatga aatagaagaa actagagtga actgcagaag ggaaaaggtc
841 atagagaccc ctgagaatga cttcaagcac cacaggagtc aaaaccactc tcggtcacct
901 agtgaagaaa gagggcacag taccaggcac cacacgaaag gatcacgaac gtcgagagga
961 catgagaaaa gggaagatca gcaccagcag aagcaatcca gagaccaaga gaaccattac
1021 actgaccgtg attaccggaa agaaagggat tctcataggc acagagaggc cagtcataga
1081 gattcccatt ggaagaggca tgaacaggaa gataaaccaa gggcgaggga ccaaagagaa
1141 agaagtgaca gagtatggaa aagggagaaa gatagggaga aatattccca aagagaacaa
1201 gaaagagata gacaacaaaa tgatcagaac cgacccagtg agaaaggaga gaaggaagag
1261 aaaagcaaag caaaggaaga gcatatgaaa gtaaggaagg aaagatatga aaataatgat
1321 aaatacagag atagagaaaa acgagaggta ggtgttcagt cttcagaaag aaatcaagac
1381 agaaaggaaa gcagcccaaa ttctagggca aaggataaat ttcttgacca agaaagatcc
1441 aacaaaatga gaaacatggc aaaggacaaa gaaagaaacc aagagaaacc ctctaattct
1501 gaatcatcac tgggagcaaa acacagactc acagaggaag ggcaagagaa gggtaaagaa
1561 caagagagac cacctgaggc agtgagcaag tttgcaaagc ggaacaatga agaaactgta
1621 atgtcagcta gagacaggta cttggccagg cagatggcgc gggttaatgc aaagacctat
1681 attgagaaag aagatgattg atggctaccc caagagaaag atttaaggaa gcacagaaaa
1741 ctgtaattcc tggaacctgc tgcgtaa
//