LOCUS BC105018 1206 bp mRNA linear HUM 21-JUL-2006
DEFINITION Homo sapiens RNA binding protein, autoantigenic (hnRNP-associated
with lethal yellow homolog (mouse)), mRNA (cDNA clone MGC:132678
IMAGE:8144021), complete cds.
ACCESSION BC105018
VERSION BC105018.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1206)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1206)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (13-SEP-2005) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Mike Brownstein, NIMH
cDNA Library Preparation: British Columbia Cancer Research Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRCB Plate: 3 Row: l Column: 3.
FEATURES Location/Qualifiers
source 1..1206
/db_xref="H-InvDB:HIT000338106"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:132678 IMAGE:8144021"
/tissue_type="Brain, cerebral cortex, PCR rescued clones"
/clone_lib="NIH_MGC_286"
/note="Vector: pCR4-TOPO; Clone identification sequence
tag: GACGTCGC"
gene 1..1206
/gene="RALY"
/gene_synonym="P542"
/db_xref="GeneID:22913"
/db_xref="HGNC:HGNC:15921"
CDS 168..1088
/gene="RALY"
/gene_synonym="P542"
/codon_start=1
/product="RNA binding protein, autoantigenic
(hnRNP-associated with lethal yellow homolog (mouse))"
/protein_id="AAI05019.1"
/db_xref="GeneID:22913"
/db_xref="HGNC:HGNC:15921"
/translation="MSLKLQASNVTNKNDPKSINSRVFIGNLNTALVKKSDVETIFSK
YGRVAGCSVHKGYAFVQYSNERHARAAVLGENGRVLAGQTLDINMAGEPKPDRPKGLK
RAASAIYSGYIFDYDYYRDDFYDRLFDYRGRLSPVPVPRAVPVKRPRVTVPLVRRVKT
NVPVKLFARSTAVTTSSAKIKLKSSELQAIKTELTQIKSNIDALLSRLEQIAAEQKAN
PDGKKKGDGGGAGGGGGGGGSGGGGSGGGGGGGSSRPPAPQENTTSEAGLPQGEARTR
DDGDEEGLLTHSEEELEHSQDTDADDGALQ"
BASE COUNT 277 a 356 c 371 g 202 t
ORIGIN
1 ctcccttacg tccccgagtg cggcagtacc gcctccttcc cagccgcgcg gcttcctcca
61 gacctctcgg cgcgggtgag ccctattccc agaggcaggt ggtgctgacc ctgtaaccca
121 aaggaggaaa cagctggcta agctcatcat tgttactggt gggcaccatg tccttgaagc
181 ttcaggcaag caatgtaacc aacaagaatg accccaagtc catcaactct cgagtcttca
241 ttggaaacct caacacagct ctggtgaaga aatcagatgt ggagaccatc ttctctaagt
301 atggccgtgt ggccggctgt tctgtgcaca agggctatgc ctttgttcag tactccaatg
361 agcgccatgc ccgggcagct gtgctgggag agaatgggcg ggtgctggcc gggcagaccc
421 tggacatcaa catggctgga gagcctaagc ctgacagacc caaggggcta aagagagcag
481 catctgccat atacagtggc tacatctttg actatgatta ctaccgggac gacttctacg
541 acaggctctt cgactaccgg ggccgtctgt cgcccgtgcc agtgcccagg gcggtccctg
601 tgaagcgacc ccgggtcaca gtccctttgg tccggcgtgt caaaactaac gtacctgtca
661 agctctttgc ccgctccaca gctgtcacca ccagctcagc caagatcaag ttaaagagca
721 gtgagctgca ggccatcaag acggagctga cacagatcaa gtccaatatc gatgccctgc
781 tgagccgctt ggagcagatc gctgcggagc aaaaggccaa tccagatggc aagaagaagg
841 gtgatggagg tggcgccggc ggcggcggcg gtggtggtgg cagcggtggc ggtggcagtg
901 gtggtggcgg tggcggtggc agcagccggc caccagcccc ccaagagaac acaacttctg
961 aggcaggcct gccccagggg gaagcacgga cccgagacga cggcgatgag gaagggctcc
1021 tgacacacag cgaggaagag ctggaacaca gccaggacac agacgcggat gatggggcct
1081 tgcagtaagc agcctgacag gagcaatggc caccagcagg tgaagggcat cgctgcccca
1141 ggcctcaagc cgggcaccca accctggatg ccacccccca gcgggtacca gaggaaagct
1201 ggcagc
//