LOCUS BC104964 4423 bp mRNA linear HUM 21-JUL-2006
DEFINITION Homo sapiens CD163 molecule-like 1, mRNA (cDNA clone MGC:132624
IMAGE:8143967), complete cds.
ACCESSION BC104964
VERSION BC104964.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4423)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 4423)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (13-SEP-2005) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Mike Brownstein, NIMH
cDNA Library Preparation: British Columbia Cancer Research Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRCB Plate: 3 Row: i Column: 21.
FEATURES Location/Qualifiers
source 1..4423
/db_xref="H-InvDB:HIT000338052"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:132624 IMAGE:8143967"
/tissue_type="Lung and heart, PCR rescued clones"
/clone_lib="NIH_MGC_317"
/note="Vector: pCR-XL-TOPO with reversed insert; Clone
identification sequence tag: AGTTATGT"
gene 1..4423
/gene="CD163L1"
/gene_synonym="CD163B"
/gene_synonym="M160"
/db_xref="GeneID:283316"
/db_xref="HGNC:HGNC:30375"
/db_xref="MIM:606079"
CDS 31..4392
/gene="CD163L1"
/gene_synonym="CD163B"
/gene_synonym="M160"
/codon_start=1
/product="CD163 molecule-like 1"
/protein_id="AAI04965.1"
/db_xref="GeneID:283316"
/db_xref="HGNC:HGNC:30375"
/db_xref="MIM:606079"
/translation="MMLPQNSWHIDFGRCCCHQNLFSAVVTCILLLNSCFLISSFNGT
DLELRLVNGDGPCSGTVEVKFQGQWGTVCDDGWNTTASTVVCKQLGCPFSFAMFRFGQ
AVTRHGKIWLDDVSCYGNESALWECQHREWGSHNCYHGEDVGVNCYGEANLGLRLVDG
NNSCSGRVEVKFQERWGTICDDGWNLNTAAVVCRQLGCPSSFISSGVVNSPAVLRPIW
LDDILCQGNELALWNCRHRGWGNHDCSHNEDVTLTCYDSSDLELRLVGGTNRCMGRVE
LKIQGRWGTVCHHKWNNAAADVVCKQLGCGTALHFAGLPHLQSGSDVVWLDGVSCSGN
ESFLWDCRHSGTVNFDCLHQNDVSVICSDGADLELRLADGSNNCSGRVEVRIHEQWWT
ICDQNWKNEQALVVCKQLGCPFSVFGSRRAKPSNEARDIWINSISCTGNESALWDCTY
DGKAKRTCFRRSDAGVICSDKADLDLRLVGAHSPCYGRLEVKYQGEWGTVCHDRWSTR
NAAVVCKQLGCGKPMHVFGMTYFKEASGPIWLDDVSCIGNESNIWDCEHSGWGKHNCV
HREDVIVTCSGDATWGLRLVGGSNRCSGRLEVYFQGRWGTVCDDGWNSKAAAVVCSQL
DCPSSIIGMGLGNASTGYGKIWLDDVSCDGDESDLWSCRNSGWGNNDCSHSEDVGVIC
SDASDMELRLVGGSSRCAGKVEVNVQGAVGILCANGWGMNIAEVVCRQLECGSAIRVS
REPHFTERTLHILMSNSGCTGGEASLWDCIRWEWKQTACHLNMEASLICSAHRQPRLV
GADMPCSGRVEVKHADTWRSVCDSDFSLHAANVLCRELNCGDAISLSVGDHFGKGNGL
TWAEKFQCEGSETHLALCPIVQHPEDTCIHSREVGVVCSRYTDVRLVNGKSQCDGQVE
INVLGHWGSLCDTHWDPEDARVLCRQLSCGTALSTTGGKYIGERSVRVWGHRFHCLGN
ESLLDNCQMTVLGAPPCIHGNTVSVICTGSLTQPLFPCLANVSDPYLSAVPEGSALIC
LEDKRLRLVDGDSRCAGRVEIYHDGFWGTICDDGWDLSDAHVVCQKLGCGVAFNATVS
AHFGEGSGPIWLDDLNCTGMESHLWQCPSRGWGQHDCRHKEDAGVICSEFTALRLYSE
TETESCAGRLEVFYNGTWGSVGRRNITTAIAGIVCRQLGCGENGVVSLAPLSKTGSGF
MWVDDIQCPKTHISIWQCLSAPWERRISSPAEETWITCEDRIRVRGGDTECSGRVEIW
HAGSWGTVCDDSWDLAEAEVVCQQLGCGSALAALRDASFGQGTGTIWLDDMRCKGNES
FLWDCHAKPWGQSDCGHKEDAGVRCSGQSLKSLNASSGHLALILSSIFGLLLLVLFIL
FLTWCRVQKQKHLPLRVSTRRRGSLEENLFHEMETCLKREDPHGTRTSDDTPNHGCED
ASDTSLLGVLPASEATK"
BASE COUNT 1082 a 900 c 1315 g 1126 t
ORIGIN
1 catcaggact caggaagaga tagacccata atgatgctgc ctcaaaactc gtggcatatt
61 gattttggaa gatgctgctg tcatcagaac cttttctctg ctgtggtaac ttgcatcctg
121 ctcctgaatt cctgctttct catcagcagt tttaatggaa cagatttgga gttgaggctg
181 gtcaatggag acggtccctg ctctgggaca gtggaggtga aattccaggg acagtggggg
241 actgtgtgtg atgatgggtg gaacactact gcctcaactg tcgtgtgcaa acagcttgga
301 tgtccatttt ctttcgccat gtttcgtttt ggacaagccg tgactagaca tggaaaaatt
361 tggcttgatg atgtttcctg ttatggaaat gagtcagctc tctgggaatg tcaacaccgg
421 gaatggggaa gccataactg ttatcatgga gaagatgttg gtgtgaactg ttacggtgaa
481 gccaatctgg gtttgaggct agtggatgga aacaactcct gttcagggag agtggaggtg
541 aaattccaag aaaggtgggg aactatatgt gatgatgggt ggaacttgaa tactgctgcc
601 gtggtgtgca ggcaactagg atgtccatct tcttttattt cttctggagt tgttaatagc
661 cctgctgtat tgcgccccat ttggctggat gacattttat gccaggggaa tgagttggca
721 ctctggaatt gcagacatcg tggatgggga aatcatgact gcagtcacaa tgaggatgtc
781 acattaactt gttatgatag tagtgatctt gaactaaggc ttgtaggtgg aactaaccgc
841 tgtatgggga gagtagagct gaaaatccaa ggaaggtggg ggaccgtatg ccaccataag
901 tggaacaatg ctgcagctga tgtcgtatgc aagcagttgg gatgtggaac cgcacttcac
961 ttcgctggct tgcctcattt gcagtcaggg tctgatgttg tatggcttga tggtgtctcc
1021 tgctccggta atgaatcttt tctttgggac tgcagacatt ccggaaccgt caattttgac
1081 tgtcttcatc aaaacgatgt gtctgtgatc tgctcagatg gagcagattt ggaactgcga
1141 ctagcagatg gaagtaacaa ttgttcaggg agagtagagg tgagaattca tgaacagtgg
1201 tggacaatat gtgaccagaa ctggaagaat gaacaagccc ttgtggtttg taagcagcta
1261 ggatgtccgt tcagcgtctt tggcagtcgt cgtgctaaac ctagtaatga agctagagac
1321 atttggataa acagcatatc ttgcactggg aatgagtcag ctctctggga ctgcacatat
1381 gatggaaaag caaagcgaac atgcttccga agatcagatg ctggagtaat ttgttctgat
1441 aaggcagatc tggacctaag gcttgtcggg gctcatagcc cctgttatgg gagattggag
1501 gtgaaatacc aaggagagtg ggggactgtg tgtcatgaca gatggagcac aaggaatgca
1561 gctgttgtgt gtaaacaatt gggatgtgga aagcctatgc atgtgtttgg tatgacctat
1621 tttaaagaag catcaggacc tatttggctg gatgacgttt cttgcattgg aaatgagtca
1681 aatatctggg actgtgaaca cagtggatgg ggaaagcata attgtgtaca cagagaggat
1741 gtgattgtaa cctgctcagg tgatgcaaca tggggcctga ggctggtggg cggcagcaac
1801 cgctgctcgg gaagactgga ggtgtacttt caaggacggt ggggcacagt gtgtgatgac
1861 ggctggaaca gtaaagctgc agctgtggtg tgtagccagc tggactgccc atcttctatc
1921 attggcatgg gtctgggaaa cgcttctaca ggatatggaa aaatttggct cgatgatgtt
1981 tcctgtgatg gagatgagtc agatctctgg tcatgcagga acagtgggtg gggaaataat
2041 gactgcagtc acagtgaaga tgttggagtg atctgttctg atgcatcgga tatggagctg
2101 aggcttgtgg gtggaagcag caggtgtgct ggaaaagttg aggtgaatgt ccagggtgcc
2161 gtgggaattc tgtgtgctaa tggctgggga atgaacattg ctgaagttgt ttgcaggcaa
2221 cttgaatgtg ggtctgcaat cagggtctcc agagagcctc atttcacaga aagaacatta
2281 cacatcttaa tgtcgaattc tggctgcact ggaggggaag cctctctctg ggattgtata
2341 cgatgggagt ggaaacagac tgcgtgtcat ttaaatatgg aagcaagttt gatctgctca
2401 gcccacaggc agcccaggct ggttggagct gatatgccct gctctggacg tgttgaagtg
2461 aaacatgcag acacatggcg ctctgtctgt gattctgatt tctctcttca tgctgccaat
2521 gtgctgtgca gagaattaaa ctgtggagat gccatatctc tttctgtggg agatcacttt
2581 ggaaaaggga atggtctaac ttgggccgaa aagttccagt gtgaagggag tgaaactcac
2641 cttgcattat gccccattgt tcaacatccg gaagacactt gtatccacag cagagaagtt
2701 ggagttgtct gttcccgata tacagatgtc cgacttgtga atggcaaatc ccagtgtgac
2761 gggcaagtgg agatcaacgt gcttggacac tggggctcac tgtgtgacac ccactgggac
2821 ccagaagatg cccgtgttct atgcagacag ctcagctgtg ggactgctct ctcaaccaca
2881 ggaggaaaat atattggaga aagaagtgtt cgtgtgtggg gacacaggtt tcattgctta
2941 gggaatgagt cacttctgga taactgtcaa atgacagttc ttggagcacc tccctgtatc
3001 catggaaata ctgtctctgt gatctgcaca ggaagcctga cccagccact gtttccatgc
3061 ctcgcaaatg tatctgaccc atatttgtct gcagttccag agggcagtgc tttgatctgc
3121 ttagaggaca aacggctccg cctagtggat ggggacagcc gctgtgccgg gagagtagag
3181 atctatcacg acggcttctg gggcaccatc tgtgatgacg gctgggacct gagcgatgcc
3241 cacgtggtgt gtcaaaagct gggctgtgga gtggccttca atgccacggt ctctgctcac
3301 tttggggagg ggtcagggcc catctggctg gatgacctga actgcacagg aatggagtcc
3361 cacttgtggc agtgcccttc ccgcggctgg gggcagcacg actgcaggca caaggaggac
3421 gcaggggtca tctgctcaga attcacagcc ttgaggctct acagtgaaac tgaaacagag
3481 agctgtgctg ggagattgga agtcttctat aacgggacct ggggcagcgt cggcaggagg
3541 aacatcacca cagccatagc aggcattgtg tgcaggcagc tgggctgtgg ggagaatgga
3601 gttgtcagcc tcgccccttt atctaagaca ggctctggtt tcatgtgggt ggatgacatt
3661 cagtgtccta aaacgcatat ctccatatgg cagtgcctgt ctgccccatg ggagcgaaga
3721 atctccagcc cagcagaaga gacctggatc acatgtgaag atagaataag agtgcgtgga
3781 ggagacaccg agtgctctgg gagagtggag atctggcacg caggctcctg gggcacagtg
3841 tgtgatgact cctgggacct ggccgaggcg gaagtggtgt gtcagcagct gggctgtggc
3901 tctgctctgg ctgccctgag ggacgcttcg tttggccagg gaactggaac catctggttg
3961 gatgacatgc ggtgcaaagg aaatgagtca tttctatggg actgtcacgc caaaccctgg
4021 ggacagagtg actgtggaca caaggaagat gctggcgtga ggtgctctgg acagtcgctg
4081 aaatcactga atgcctcctc aggtcattta gcacttattt tatccagtat ctttgggctc
4141 cttctcctgg ttctgtttat tctatttctc acgtggtgcc gagttcagaa acaaaaacat
4201 ctgcccctca gagtttcaac cagaaggagg ggttctctcg aggagaattt attccatgag
4261 atggagacct gcctcaagag agaggaccca catgggacaa gaacctcaga tgacaccccc
4321 aaccatggtt gtgaagatgc tagcgacaca tcgctgttgg gagttcttcc tgcctctgaa
4381 gccacaaaat gactttagac ttccagggct caccagatca acc
//