LOCUS BC104937 1143 bp mRNA linear HUM 21-JUL-2006
DEFINITION Homo sapiens taste receptor, type 2, member 38, mRNA (cDNA clone
MGC:132597 IMAGE:8143940), complete cds.
ACCESSION BC104937
VERSION BC104937.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1143)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1143)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (13-SEP-2005) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Mike Brownstein, NIMH
cDNA Library Preparation: British Columbia Cancer Research Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRCB Plate: 3 Row: h Column: 18.
FEATURES Location/Qualifiers
source 1..1143
/db_xref="H-InvDB:HIT000338025"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:132597 IMAGE:8143940"
/tissue_type="Pooled,bladder, uterus, placenta, PCR
rescued clones"
/clone_lib="NIH_MGC_349"
/lab_host="DH10B"
/note="Vector: pCR4-TOPO; Clone identification sequence
tag: CGCCTGTC"
gene 1..1143
/gene="TAS2R38"
/gene_synonym="T2R61"
/db_xref="GeneID:5726"
/db_xref="HGNC:HGNC:9584"
/db_xref="MIM:607751"
CDS 85..1086
/gene="TAS2R38"
/gene_synonym="T2R61"
/codon_start=1
/product="taste receptor, type 2, member 38"
/protein_id="AAI04938.1"
/db_xref="GeneID:5726"
/db_xref="HGNC:HGNC:9584"
/db_xref="MIM:607751"
/translation="MLTLTRIRTVSYEVRSTFLFISVLEFAVGFLTNAFVFLVNFWDV
VKRQALSNSDCVLLCLSISRLFLHGLLFLSAIQLTHFQKLSEPLNHSYQAIIMLWMIA
NQANLWLAACLSLLYCSKLIRFSHTFLICLASWVSRKISQMLLGIILCSCICTVLCVW
CFFSRPHFTVTTVLFMNNNTRLNWQIKDLNLFYSFLFCYLWSVPPFLLFLVSSGMLTV
SLGRHMRTMKVYTRNSRDPSLEAHIKALKSLVSFFCFFVISSCVAFISVPLLILWRDK
IGVMVCVGIMAACPSGHAAILISGNAKLRRAVMTILLWAQSSLKVRADHKADSRTLC"
BASE COUNT 248 a 289 c 261 g 345 t
ORIGIN
1 cctttctgca ctgggtggca accaggtctt tagattagcc aactagagaa gagaagtaga
61 atagccaatt agagaagtga catcatgttg actctaactc gcatccgcac tgtgtcctat
121 gaagtcagga gtacatttct gttcatttca gtcctggagt ttgcagtggg gtttctgacc
181 aatgccttcg ttttcttggt gaatttttgg gatgtagtga agaggcaggc actgagcaac
241 agtgattgtg tgctgctgtg tctcagcatc agccggcttt tcctgcatgg actgctgttc
301 ctgagtgcta tccagcttac ccacttccag aagttgagtg aaccactgaa ccacagctac
361 caagccatca tcatgctatg gatgattgca aaccaagcca acctctggct tgctgcctgc
421 ctcagcctgc tttactgctc caagctcatc cgtttctctc acaccttcct gatctgcttg
481 gcaagctggg tctccaggaa gatctcccag atgctcctgg gtattattct ttgctcctgc
541 atctgcactg tcctctgtgt ttggtgcttt tttagcagac ctcacttcac agtcacaact
601 gtgctattca tgaataacaa tacaaggctc aactggcaga ttaaagatct caatttattt
661 tattcctttc tcttctgcta tctgtggtct gtgcctcctt tcctattgtt tctggtttct
721 tctgggatgc tgactgtctc cctgggaagg cacatgagga caatgaaggt ctataccaga
781 aactctcgtg accccagcct ggaggcccac attaaagccc tcaagtctct tgtctccttt
841 ttctgcttct ttgtgatatc atcctgtgtt gccttcatct ctgtgcccct actgattctg
901 tggcgcgaca aaataggggt gatggtttgt gttgggataa tggcagcttg tccctctggg
961 catgcagcca tcctgatctc aggcaatgcc aagttgagga gagctgtgat gaccattctg
1021 ctctgggctc agagcagcct gaaggtaaga gccgaccaca aggcagattc ccggacactg
1081 tgctgagaat ggacatgaaa tgagctcttc attaatacgc ctgtgagtct tcataaatat
1141 gcc
//