LOCUS BC104930 1117 bp mRNA linear HUM 27-JAN-2006
DEFINITION Homo sapiens chromosome X open reading frame 40A, mRNA (cDNA clone
MGC:132590 IMAGE:8143933), complete cds.
ACCESSION BC104930
VERSION BC104930.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1117)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1117)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (13-SEP-2005) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Mike Brownstein, NIMH
cDNA Library Preparation: British Columbia Cancer Research Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRCB Plate: 3 Row: h Column: 11.
FEATURES Location/Qualifiers
source 1..1117
/db_xref="H-InvDB:HIT000338018"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:132590 IMAGE:8143933"
/tissue_type="Brain, cerebral cortex and lung, PCR rescued
clones"
/clone_lib="NIH_MGC_323"
/note="Vector: pCR4-TOPO with reversed insert; Clone
identification sequence tag: CCGAGCCA"
gene 1..1117
/gene="CXorf40A"
/gene_synonym="EOLA1"
/db_xref="GeneID:91966"
/db_xref="HGNC:HGNC:28089"
/db_xref="IMGT/GENE-DB:28089"
/db_xref="MIM:28089"
CDS 449..925
/gene="CXorf40A"
/gene_synonym="EOLA1"
/codon_start=1
/product="CXorf40A protein"
/protein_id="AAI04931.1"
/db_xref="GeneID:91966"
/db_xref="HGNC:HGNC:28089"
/db_xref="IMGT/GENE-DB:28089"
/db_xref="MIM:28089"
/translation="MKFGCLSFRQPYAGFVLNGIKTVETRWRPLLSSQRNCTIAVHIA
HRDWEGDAWRELLVERLGMTPAQIQALLRKGEKFGRGVIAGLVDIGETLQCPEDLTPD
EVVELENQAVLTNLKQKYLTVISNPRWLLEPIPRKGGKDVFQVDIPEHLIPLGHEV"
BASE COUNT 252 a 294 c 335 g 236 t
ORIGIN
1 acgtctcctt gcttgggagc ccatcgtcct ggctccggtg gcctcgctgg gtctcgggga
61 agcagaggac tgttcattcc tgtggcgaaa agccggagtc ggccctagac acccacgact
121 cgcagggtcc atggttccgg aggccgtgag acctgccggg gctgacaggt gccagggccc
181 atgctgcggg agcctgtgtg ctcagccttc ttgcggacgg taaagaagct aagtggaaga
241 gtgtttcctc ctctggccgt aaagcaggta ctctctgcag caccagctgt ccccgcccta
301 ctccggaccg ccccaaagac tccatgggat ggacctgagt cagccgaatc ccagcccctt
361 cccttgggcc tgctgtggtg ctggacatca gtgacagacg gaagcaggag accatcaagg
421 ctacgggagg cccggggcgc ttgcgaagat gaagtttggc tgcctctcct tccggcagcc
481 ttatgctggc tttgtcttaa atggaatcaa gactgtggag acgcgctggc gtcccctgct
541 gagcagccag cggaactgta ccatcgccgt ccacattgct cacagggact gggaaggcga
601 tgcctggcgg gagctgctgg tggagagact cgggatgact cctgctcaga ttcaggcctt
661 gctcaggaaa ggggaaaagt ttggtcgagg agtgatagcg ggactcgttg acattgggga
721 aactttgcaa tgccccgaag acttaactcc cgatgaggtt gtggaactag aaaatcaagc
781 tgtactgacc aacctgaagc agaagtacct gactgtgatt tcaaacccca ggtggttact
841 ggagcccata cctaggaaag gaggcaagga tgtattccag gtagacatcc cagagcacct
901 gatccctttg gggcatgaag tgtgacaagt gtgggctcct gaaaggaatg ttccagagaa
961 accagctaaa tcatgacacc ttcaatttgc catcatgacg cagacctgta tacattaggt
1021 taaatctgaa tttccactgc tttggagagt cccacccact aagcactgtg catgtaaaca
1081 ggttcctttg ctcagatgaa ggaagtaggg ggtgggg
//