LOCUS BC104903 2318 bp mRNA linear HUM 21-JUL-2006
DEFINITION Homo sapiens ATP-binding cassette, sub-family D (ALD), member 2,
mRNA (cDNA clone MGC:132563 IMAGE:8143906), complete cds.
ACCESSION BC104903
VERSION BC104903.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2318)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2318)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (13-SEP-2005) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Mike Brownstein, NIMH
cDNA Library Preparation: British Columbia Cancer Research Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRCB Plate: 3 Row: g Column: 8.
FEATURES Location/Qualifiers
source 1..2318
/db_xref="H-InvDB:HIT000337991"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:132563 IMAGE:8143906"
/tissue_type="Liver, PCR rescued clones"
/clone_lib="NIH_MGC_291"
/note="Vector: pCR4-TOPO with reversed insert; Clone
identification sequence tag: CATTGTCC"
gene 1..2318
/gene="ABCD2"
/gene_synonym="ABC39"
/gene_synonym="ALDR"
/gene_synonym="ALDRP"
/gene_synonym="hALDR"
/db_xref="GeneID:225"
/db_xref="HGNC:HGNC:66"
/db_xref="MIM:601081"
CDS 27..2249
/gene="ABCD2"
/gene_synonym="ABC39"
/gene_synonym="ALDR"
/gene_synonym="ALDRP"
/gene_synonym="hALDR"
/codon_start=1
/product="ATP-binding cassette, sub-family D (ALD), member
2"
/protein_id="AAI04904.1"
/db_xref="GeneID:225"
/db_xref="HGNC:HGNC:66"
/db_xref="MIM:601081"
/translation="MTHMLNAAADRVKWTRSSAAKRAACLVAAAYALKTLYPIIGKRL
KQSGHGKKKAAAYPAAENTEILHCTETICEKPSPGVNADFFKQLLELRKILFPKLVTT
ETGWLCLHSVALISRTFLSIYVAGLDGKIVKSIVEKKPRTFIIKLIKWLMIAIPATFV
NSAIRYLECKLALAFRTRLVDHAYETYFTNQTYYKVINMDGRLANPDQSLTEDIMMFS
QSVAHLYSNLTKPILDVMLTSYTLIQTATSRGASPIGPTLLAGLVVYATAKVLKACSP
KFGKLVAEEAHRKGYLRYVHSRIIANVEEIAFYRGHKVEMKQLQKSYKALADQMNLIL
SKRLWYIMIEQFLMKYVWSSSGLIMVAIPIITATGFADGEDGQKQVMVSERTEAFTTA
RNLLASGADAIERIMSSYKEVTELAGYTARVYNMFWVFDEVKRGIYKRTAVIQESESH
SKNGAKVELPLSDTLAIKGKVIDVDHGIICENVPIITPAGEVVASRLNFKVEEGMHLL
ITGPNGCGKSSLFRILSGLWPVYEGVLYKPPPQHMFYIPQRPYMSLGSLRDQVIYPDS
VDDMHDKGYTDQDLERILHNVHLYHIVQREGGWDAVMDWKDVLSGGEKQRMGMARMFY
HKPKYALLDECTSAVSIDVEGKIFQAAKGAGISLLSITHRPSLWKYHTHLLQFDGEGG
WRFEQLDTAIRLTLSEEKQKLESQLAGIPKMQQRLNELCKILGEDSVLKTIKNEDETS
"
BASE COUNT 725 a 446 c 519 g 628 t
ORIGIN
1 ggaagccggt ttgggtaact gggaaaatga cacatatgct aaatgcagca gctgatcgag
61 tgaaatggac cagatcgagt gctgctaaga gggctgcctg cctggtggct gcggcatatg
121 ctctgaaaac cctctatccc atcattggca agcgtttaaa gcaatctggc cacgggaaga
181 aaaaagcagc agcttaccct gctgcagaga acacagaaat actgcattgc accgagacca
241 tttgtgaaaa accttcgcct ggagtgaatg cagatttctt caaacagcta ctagaacttc
301 ggaaaatttt gtttccaaaa cttgtgacca ctgaaacagg gtggctctgc ctgcactcag
361 tggctctaat ctcaagaacc tttctttcta tctatgtggc tggtctggat ggaaaaatcg
421 tgaaaagcat tgtggaaaag aagcctcgga ctttcatcat caaattaatc aagtggctta
481 tgattgccat ccctgctacc ttcgtcaaca gtgcaataag gtacctggaa tgcaaattgg
541 ctttggcctt cagaactcgc ctagtagacc acgcctatga aacctatttt acaaatcaga
601 cttattataa agtgatcaat atggatggga ggctggcaaa ccctgaccaa tctcttacgg
661 aggatattat gatgttctcc caatctgtgg ctcacttgta ttccaatctg accaaaccta
721 ttttagatgt aatgctgacc tcctatacac tcattcaaac tgctacatcc agaggagcaa
781 gcccaattgg gcccacccta ctagcaggac ttgtggtgta tgccactgct aaagtgttaa
841 aagcctgttc tcccaaattt ggcaaactgg tggcagagga agcacataga aaaggctatt
901 tgcggtatgt gcactcgaga attatagcca atgtagaaga aattgccttt tacagaggac
961 ataaggtaga aatgaaacaa cttcagaaaa gttacaaagc tttagcagat cagatgaacc
1021 tcattttatc caaacgtttg tggtacatca tgatagaaca gttcctgatg aagtatgttt
1081 ggagcagcag tggactaatt atggtggcta tacctattat cactgcaact ggctttgcag
1141 atggtgagga tggccaaaag caagttatgg ttagtgaacg gacagaagcc tttaccactg
1201 ctcgaaattt actggcctct ggagctgatg ctattgaaag gattatgtct tcatacaaag
1261 aggtcactga attagcaggc tacactgctc gagtgtacaa tatgttttgg gtctttgatg
1321 aagtaaaaag aggcatttat aagagaactg ctgtcattca agaatctgaa agccatagca
1381 agaatggagc taaggtagaa ttacctctca gtgacacatt ggcaattaaa ggaaaagtta
1441 ttgatgtgga tcacggaatt atttgtgaaa atgttcccat aattacacca gcaggagaag
1501 tggtggcttc caggctaaac ttcaaagtag aagaaggaat gcatcttttg ataactggtc
1561 ccaatggttg tgggaaaagt tctctcttca gaattctaag tgggctctgg cctgtgtatg
1621 aaggagtcct ctataaacca cctcctcaac atatgtttta tattccacaa aggccatata
1681 tgtctcttgg aagtcttcgg gatcaagtca tttaccctga ttcagtggat gatatgcatg
1741 ataaaggtta tacagaccaa gatctggaac gtatcctaca caatgtccat ctctatcaca
1801 tagttcaaag agaaggagga tgggatgctg ttatggactg gaaagatgtc ctgtcaggag
1861 gggaaaagca aagaatgggc atggctcgta tgttttatca taaaccaaaa tatgccttgc
1921 tggatgaatg taccagtgct gtcagcattg atgtcgaagg aaagatattt caggctgcaa
1981 aaggggctgg aatttcctta ctgtctataa cacacagacc ttctctttgg aaataccaca
2041 cacatttatt acagtttgat ggtgaaggag gttggcgctt tgaacaattg gatactgcta
2101 tccgtttgac attgagtgaa gaaaaacaaa agctagaatc tcagctagct ggaattccca
2161 aaatgcagca gagactcaat gaactatgta aaattttggg agaagactca gtgctgaaaa
2221 caattaaaaa tgaagatgag acatcttaat ttgttttgac atattttaaa agttaattat
2281 tagataaagg ctcaaagaca ttctgttata ctgcatga
//