LOCUS BC104901 2324 bp mRNA linear HUM 19-JAN-2006
DEFINITION Homo sapiens ATP-binding cassette, sub-family D (ALD), member 2,
mRNA (cDNA clone MGC:132561 IMAGE:8143904), complete cds.
ACCESSION BC104901
VERSION BC104901.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2324)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2324)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (13-SEP-2005) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Mike Brownstein, NIMH
cDNA Library Preparation: British Columbia Cancer Research Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRCB Plate: 3 Row: g Column: 6.
FEATURES Location/Qualifiers
source 1..2324
/db_xref="H-InvDB:HIT000337989"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:132561 IMAGE:8143904"
/tissue_type="Liver, PCR rescued clones"
/clone_lib="NIH_MGC_291"
/note="Vector: pCR4-TOPO with reversed insert; Clone
identification sequence tag: AAGTGACA"
gene 1..2324
/gene="ABCD2"
/gene_synonym="ABC39"
/gene_synonym="ALDR"
/gene_synonym="ALDRP"
/gene_synonym="hALDR"
/db_xref="GeneID:225"
/db_xref="HGNC:HGNC:66"
/db_xref="IMGT/GENE-DB:66"
/db_xref="MIM:601081"
CDS 33..2255
/gene="ABCD2"
/gene_synonym="ABC39"
/gene_synonym="ALDR"
/gene_synonym="ALDRP"
/gene_synonym="hALDR"
/codon_start=1
/product="ATP-binding cassette, sub-family D, member 2"
/protein_id="AAI04902.1"
/db_xref="GeneID:225"
/db_xref="HGNC:HGNC:66"
/db_xref="IMGT/GENE-DB:66"
/db_xref="MIM:601081"
/translation="MTHMLNAAADRVKWTRSSAAKRAACLVAAAYALKTLYPIIGKRL
KQSGHGKKKAAAYPAAENTEILHCTETICEKPSPGVNADFFKQLLELRKILFPKLVTT
ETGWLCLHSVALISRTFLSIYVAGLDGKIVKSIVEKKPRTFIIKLIKWLMIAIPATFV
NSAIRYLECKLALAFRTRLVDHAYETYFTNQTYYKVINMDGRLANPDQSLTEDIMMFS
QSVAHLYSNLTKPILDVMLTSYTLIQTATSRGASPIGPTLLAGLVVYATAKVLKACSP
KFGKLVAEEAHRKGYLRYVHSRIIANVEEIAFYRGHKVEMKQLQKSYKALADQMNLIL
SKRLWYIMIEQFLMKYVWSSSGLIMVAIPIITATGFADGEDGQKQVMVSERTEAFTTA
RNLLASGADAIERIMSSYKEVTELAGYTARVYNMFWVFDEVKRGIYKRTAVIQESESH
SKNGAKVELPLSDTLAIKGKVIDVDHGIICENVPIITPAGEVVASRLNFKVEEGMHLL
ITGPNGCGKSSLFRILSGLWPVYEGVLYKPPPQHMFYIPQRPYMSLGSLRDQVIYPDS
VDDMHDKGYTDQDLERILHNVHLYHIVQREGGWDAVMDWKDVLSGGEKQRMGMARMFY
HKPKYALLDECTSAVSIDVEGKIFQAAKGAGISLLSITHRPSLWKYHTHLLQFDGEGG
WRFEQLDTAIRLTLSEEKQKLESQLAGIPKMQQRLNELCKILGEDSVLKTIKNEDETS
"
BASE COUNT 725 a 447 c 519 g 633 t
ORIGIN
1 tcttttggaa gccggtttgg gtaactggga aaatgacaca tatgctaaat gcagcagctg
61 atcgagtgaa atggaccaga tcgagtgctg ctaagagggc tgcctgcctg gtggctgcgg
121 catatgctct gaaaaccctc tatcccatca ttggcaagcg tttaaagcaa tctggccacg
181 ggaagaaaaa agcagcagct taccctgctg cagagaacac agaaatactg cattgcaccg
241 agaccatttg tgaaaaacct tcgcctggag tgaatgcaga tttcttcaaa cagctactag
301 aacttcggaa aattttgttt ccaaaacttg tgaccactga aacagggtgg ctctgcctgc
361 actcagtggc tctaatctca agaacctttc tttctatcta tgtggctggt ctggatggaa
421 aaatcgtgaa aagcattgtg gaaaagaagc ctcggacttt catcatcaaa ttaatcaagt
481 ggcttatgat tgccatccct gctaccttcg tcaacagtgc aataaggtac ctggaatgca
541 aattggcttt ggccttcaga actcgcctag tagaccacgc ctatgaaacc tattttacaa
601 atcagactta ttataaagtg atcaatatgg atgggaggct ggcaaaccct gaccaatctc
661 ttacggagga tattatgatg ttctcccaat ctgtggctca cttgtattcc aatctgacca
721 aacctatttt agatgtaatg ctgacctcct atacactcat tcaaactgct acatccagag
781 gagcaagccc aattgggccc accctactag caggacttgt ggtgtatgcc actgctaaag
841 tgttaaaagc ctgttctccc aaatttggca aactggtggc agaggaagca catagaaaag
901 gctatttgcg gtatgtgcac tcgagaatta tagccaatgt agaagaaatt gccttttaca
961 gaggacataa ggtagaaatg aaacaacttc agaaaagtta caaagcttta gcagatcaga
1021 tgaacctcat tttatccaaa cgtttgtggt acatcatgat agaacagttc ctgatgaagt
1081 atgtttggag cagcagtgga ctaattatgg tggctatacc tattatcact gcaactggct
1141 ttgcagatgg tgaggatggc caaaagcaag ttatggttag tgaacggaca gaagccttta
1201 ccactgctcg aaatttactg gcctctggag ctgatgctat tgaaaggatt atgtcttcat
1261 acaaagaggt cactgaatta gcaggctaca ctgctcgagt gtacaatatg ttttgggtct
1321 ttgatgaagt aaaaagaggc atttataaga gaactgctgt cattcaagaa tctgaaagcc
1381 atagcaagaa tggagctaag gtagaattac ctctcagtga cacattggca attaaaggaa
1441 aagttattga tgtggatcac ggaattattt gtgaaaatgt tcccataatt acaccagcag
1501 gagaagtggt ggcttccagg ctaaacttca aagtagaaga aggaatgcat cttttgataa
1561 ctggtcccaa tggttgtggg aaaagttctc tcttcagaat tctaagtggg ctctggcctg
1621 tgtatgaagg agtcctctat aaaccacctc ctcaacatat gttttatatt ccacaaaggc
1681 catatatgtc tcttggaagt cttcgggatc aagtcattta ccctgattca gtggatgata
1741 tgcatgataa aggttataca gaccaagatc tggaacgtat cctacacaat gtccatctct
1801 atcacatagt tcaaagagaa ggaggatggg atgctgttat ggactggaaa gatgtcctgt
1861 caggagggga aaagcaaaga atgggcatgg ctcgtatgtt ttatcataaa ccaaaatatg
1921 ccttgctgga tgaatgtacc agtgctgtca gcattgatgt cgaaggaaag atatttcagg
1981 ctgcaaaagg ggctggaatt tccttactgt ctataacaca cagaccttct ctttggaaat
2041 accacacaca tttattacag tttgatggtg aaggaggttg gcgctttgaa caattggata
2101 ctgctatccg tttgacattg agtgaagaaa aacaaaagct agaatctcag ctagctggaa
2161 ttcccaaaat gcagcagaga ctcaatgaac tatgtaaaat tttgggagaa gactcagtgc
2221 tgaaaacaat taaaaatgaa gatgagacat cttaatttgt tttgacatat tttaaaagtt
2281 aattattaga taaaggctca aagacattct gttatactgc atga
//