LOCUS BC104864 1109 bp mRNA linear HUM 21-JUL-2006
DEFINITION Homo sapiens UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase,
polypeptide 5, mRNA (cDNA clone MGC:132524 IMAGE:8143867), complete
cds.
ACCESSION BC104864
VERSION BC104864.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1109)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1109)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (13-SEP-2005) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Mike Brownstein, NIMH
cDNA Library Preparation: British Columbia Cancer Research Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRCB Plate: 3 Row: e Column: 17.
FEATURES Location/Qualifiers
source 1..1109
/db_xref="H-InvDB:HIT000337952"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:132524 IMAGE:8143867"
/tissue_type="Colon, PCR rescued clones"
/clone_lib="NIH_MGC_295"
/note="Vector: pCR4-TOPO with reversed insert; Clone
identification sequence tag: AGAAGTAC"
gene 1..1109
/gene="B3GALT5"
/gene_synonym="B3GalT-V"
/gene_synonym="B3GalTx"
/gene_synonym="B3T5"
/gene_synonym="beta3Gal-T5"
/gene_synonym="GLCT5"
/db_xref="GeneID:10317"
/db_xref="HGNC:HGNC:920"
/db_xref="MIM:604066"
CDS 92..1024
/gene="B3GALT5"
/gene_synonym="B3GalT-V"
/gene_synonym="B3GalTx"
/gene_synonym="B3T5"
/gene_synonym="beta3Gal-T5"
/gene_synonym="GLCT5"
/codon_start=1
/product="UDP-Gal:betaGlcNAc beta
1,3-galactosyltransferase, polypeptide 5"
/protein_id="AAI04865.1"
/db_xref="GeneID:10317"
/db_xref="HGNC:HGNC:920"
/db_xref="MIM:604066"
/translation="MAFPKMRLMYICLLVLGALCLYFSMYSLNPFKEQSFVYKKDGNF
LKLPDTDCRQTPPFLVLLVTSSHKQLAERMAIRQTWGKERTVKGKQLKTFFLLGTTSS
AAETKEVDQESQRHGDIIQKDFLDVYYNLTLKTMMGIEWVHRFCPQAAFVMKTDSDMF
INVDYLTELLLKKNRTTRFFTGFLKLNEFPIRQPFSKWFVSKSEYPWDRYPPFCSGTG
YVFSGDVASQVYNVSKSVPYIKLEDVFVGLCLERLNIRLEELHSQPTFFPGGLRFSVC
LFRRIVACHFIKPRTLLDYWQALENSRGEDCPPV"
BASE COUNT 268 a 276 c 286 g 279 t
ORIGIN
1 cgggtctcct ctcccacctc agcctcctag cataaaacta gacacatcct catgcttttg
61 aggtctaatc attggatttt gttcctttca gatggctttc ccgaagatga gattgatgta
121 tatttgcctt ctggttctgg gggctctttg tttgtatttt agcatgtaca gtctaaatcc
181 tttcaaagaa cagtcctttg tttacaagaa agacgggaac ttccttaagc tcccagatac
241 agactgcagg cagacacctc ccttcctcgt cctgctggtg acctcatccc acaaacagtt
301 ggctgagcgc atggccatcc ggcagacgtg ggggaaagag aggacggtga agggaaagca
361 gctgaagaca ttcttcctcc tggggaccac cagcagtgca gcggaaacaa aagaggtgga
421 ccaggagagc cagcgacacg gggacattat ccagaaggat ttcctagacg tctattacaa
481 tctgaccctg aagaccatga tgggcataga atgggtccat cgcttttgtc ctcaggcggc
541 gtttgtgatg aaaacagact cagacatgtt catcaatgtt gactatctga ctgaactgct
601 tctgaagaaa aacagaacaa ccaggttttt cactggcttc ttgaaactca atgagtttcc
661 catcaggcag ccattcagca agtggtttgt cagtaaatct gaatatccgt gggacaggta
721 cccaccattc tgctccggca ccggctacgt gttttctggc gacgtggcga gtcaggtgta
781 caatgtctcc aagagcgtcc catacattaa actggaagac gtgtttgtgg ggctctgcct
841 cgaaaggctg aacatcagat tggaggagct ccactcccag ccgacctttt ttccaggggg
901 cttacgcttc tccgtatgcc tcttcaggag gatcgtggcc tgccacttca tcaagcctcg
961 gactctcttg gactactggc aggctctaga gaattcccgg ggggaagatt gtccgcctgt
1021 ctgaggggag cccagaggca catccggaca agtttcagat aacccgtggg gatagttttt
1081 gctagatttt ggaagagggg gcgggacag
//