LOCUS BC104843 1946 bp mRNA linear HUM 21-JUL-2006 DEFINITION Homo sapiens patatin-like phospholipase domain containing 5, mRNA (cDNA clone MGC:132503 IMAGE:8143846), complete cds. ACCESSION BC104843 VERSION BC104843.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1946) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1946) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (13-SEP-2005) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Mike Brownstein, NIMH cDNA Library Preparation: British Columbia Cancer Research Center cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRCB Plate: 3 Row: d Column: 20. FEATURES Location/Qualifiers source 1..1946 /db_xref="H-InvDB:HIT000337931" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:132503 IMAGE:8143846" /tissue_type="Brain, cerebral cortex, PCR rescued clones" /clone_lib="NIH_MGC_286" /note="Vector: pCR4-TOPO; Clone identification sequence tag: CTTCACCT" gene 1..1946 /gene="PNPLA5" /gene_synonym="4833426H19Rik" /gene_synonym="dJ388M5.4" /gene_synonym="GS2L" /db_xref="GeneID:150379" /db_xref="HGNC:HGNC:24888" CDS 48..1337 /gene="PNPLA5" /gene_synonym="4833426H19Rik" /gene_synonym="dJ388M5.4" /gene_synonym="GS2L" /codon_start=1 /product="patatin-like phospholipase domain containing 5" /protein_id="AAI04844.1" /db_xref="GeneID:150379" /db_xref="HGNC:HGNC:24888" /translation="MGFLEEEGRWNLSFSGAGYLGAHHVGATECLRQRAPRLLQGARR IYGSSSGALNAVSIVCGKSVDFCCSHLLGMVGQLERLSLSILHPAYAPIEHVKQQLQD ALPPDAHVLASQRLGISLTRWPDGRNFLVTDFATCDELIQALVCTLYFPFYCGLIPPE FRGERYIDGALSNNLPFADCPSTITVSPFHGTVDICPQSTSPNLHELNVFNFSFQIST ENFFLGLICLIPPSLEVVADNCRQGYLDALRFLERRGLTKEPVLWTLVSKEPPAPADG NWDAGCDQRWKGGLSLNWKVPHVQVKDVPNFEQLSPELEAALKKACTRDPSRWARFWH SGPGQVLTYLLLPCTLPFEYIYFRSRRLVVWLPDVPADLWWMQGLLRNMALEVFSRTK AQLLGPISPPATRVLETSPLQPQIAPHREELGPTHQA" BASE COUNT 351 a 645 c 573 g 377 t ORIGIN 1 cggagtgacc cttcctcgtc ccgatcaccc cgcccggtcc acccgccatg ggcttcttag 61 aggaggaggg cagatggaac ctgtccttct ccggcgccgg ctacctgggc gcccaccacg 121 tgggcgccac cgaatgcctg cgccagcgag ccccgcgcct cctccagggc gcccgccgca 181 tctacggttc ctcgtctggg gcgctcaacg cagtcagcat cgtctgcggc aagtcggtcg 241 acttctgctg ctcccacctc ctgggcatgg ttgggcagtt ggagcggctg agcctaagca 301 tcctgcaccc ggcctacgcg cccatcgagc acgtcaagca gcagctgcag gatgctctgc 361 cccccgacgc ccacgtcctg gcctcccagc ggctgggcat ttcgctgacc cgctggcctg 421 acggacgcaa cttcttggtc actgacttcg ccacctgcga tgagctcatc caggccttgg 481 tctgcacctt atactttcct ttctactgcg ggctgatccc ccccgagttc agaggggagc 541 gctacatcga tggggctctg agcaacaact tgccctttgc agactgcccc tccaccatca 601 cggtgtcgcc cttccatggg acagtggaca tctgccccca gagcacctcc cccaacctgc 661 atgagctgaa cgtcttcaac ttcagcttcc aaatctccac tgagaacttc ttcctggggc 721 tcatatgtct catacccccc agcctcgagg tagtggccga caactgcaga caaggctacc 781 tggatgccct gaggttcctg gagagacgtg gactcaccaa ggaaccagtg ctatggacgc 841 tggtgtctaa ggaaccccca gccccggctg acggaaactg ggatgctggc tgtgaccaac 901 gctggaaggg gggcctgtct ctcaactgga aagtgcccca tgtgcaagtc aaggatgtac 961 ccaactttga gcagctctca ccagagctgg aggctgcact gaagaaagca tgtacgaggg 1021 atcccagccg gtgggcccgc ttctggcact cggggcctgg acaggtgctg acgtacctgc 1081 tgctaccctg cacactgccc ttcgagtaca tctacttccg cagcagaagg ttggtggtgt 1141 ggctgcccga tgtgccggcg gacttgtggt ggatgcaggg cctgctgagg aacatggccc 1201 tcgaggtttt ctccaggacc aaggcccagc tccttgggcc catcagccct ccggccactc 1261 gcgtcctgga aacaagcccc ctccaacccc agatagctcc tcatagagag gagctcgggc 1321 ccacccacca ggcctgaggg ggccgagcag ggccagccca gtgactggtg tcccttgatt 1381 cctgctctgg cctttgtcct gtgtgcccac atctgcccca gcgggaagag gccctgccaa 1441 tctccgtgga gaccctgcag cttggagccc gttccttggg gcgcagcctg tcagcatgtc 1501 cccggtcact gtgtacccag gtcacctgcc ctccctcttg ccccgtctca tcagggagag 1561 aaaggaggac agccacagag acacatgtct tactttcaga atttccacgg ggggactagg 1621 agggcagcat tgctggggag aggggctcct gttctgccgt ggagctgccc acggagcacc 1681 tcacagaaga ttgagaaagt gcctgatgcc cgcgtcagag accagaggag ccaactgaga 1741 tgatggggtg ggggtgctcc ccccagactt tctcagtcct gcagcggccc ttgggggtga 1801 cccccggcat ctaccccact caggaaacct tgacttctga cttcctatca ggtccagagg 1861 gtggaaggcc ctggcaggaa gcaggaggag gaggagaggg gggtccgggt cttttcagga 1921 tcccagctgt gggtgcttct gttggg //