LOCUS       BC104843                1946 bp    mRNA    linear   HUM 21-JUL-2006
DEFINITION  Homo sapiens patatin-like phospholipase domain containing 5, mRNA
            (cDNA clone MGC:132503 IMAGE:8143846), complete cds.
ACCESSION   BC104843
VERSION     BC104843.1
KEYWORDS    MGC.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 1946)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   2  (bases 1 to 1946)
  CONSRTM   NIH MGC Project
  TITLE     Direct Submission
  JOURNAL   Submitted (13-SEP-2005) National Institutes of Health, Mammalian
            Gene Collection (MGC), Bethesda, MD 20892-2590, USA
  REMARK    NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT     Contact: MGC help desk
            Email: cgapbs-r@mail.nih.gov
            Tissue Procurement: Mike Brownstein, NIMH
            cDNA Library Preparation: British Columbia Cancer Research Center
            cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
            DNA Sequencing by: Genome Sequence Centre,
            BC Cancer Agency, Vancouver, BC, Canada
            info@bcgsc.bc.ca
            Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
            Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
            Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
            Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
            Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
            Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
            Kim MacDonald,  Mike R. Mayo, Josh Moran, Diana Palmquist, JR
            Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
            Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
            
            Clone distribution: MGC clone distribution information can be found
            through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
            Series: IRCB Plate: 3 Row: d Column: 20.
FEATURES             Location/Qualifiers
     source          1..1946
                     /db_xref="H-InvDB:HIT000337931"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /clone="MGC:132503 IMAGE:8143846"
                     /tissue_type="Brain, cerebral cortex, PCR rescued clones"
                     /clone_lib="NIH_MGC_286"
                     /note="Vector: pCR4-TOPO; Clone identification sequence
                     tag: CTTCACCT"
     gene            1..1946
                     /gene="PNPLA5"
                     /gene_synonym="4833426H19Rik"
                     /gene_synonym="dJ388M5.4"
                     /gene_synonym="GS2L"
                     /db_xref="GeneID:150379"
                     /db_xref="HGNC:HGNC:24888"
     CDS             48..1337
                     /gene="PNPLA5"
                     /gene_synonym="4833426H19Rik"
                     /gene_synonym="dJ388M5.4"
                     /gene_synonym="GS2L"
                     /codon_start=1
                     /product="patatin-like phospholipase domain containing 5"
                     /protein_id="AAI04844.1"
                     /db_xref="GeneID:150379"
                     /db_xref="HGNC:HGNC:24888"
                     /translation="MGFLEEEGRWNLSFSGAGYLGAHHVGATECLRQRAPRLLQGARR
                     IYGSSSGALNAVSIVCGKSVDFCCSHLLGMVGQLERLSLSILHPAYAPIEHVKQQLQD
                     ALPPDAHVLASQRLGISLTRWPDGRNFLVTDFATCDELIQALVCTLYFPFYCGLIPPE
                     FRGERYIDGALSNNLPFADCPSTITVSPFHGTVDICPQSTSPNLHELNVFNFSFQIST
                     ENFFLGLICLIPPSLEVVADNCRQGYLDALRFLERRGLTKEPVLWTLVSKEPPAPADG
                     NWDAGCDQRWKGGLSLNWKVPHVQVKDVPNFEQLSPELEAALKKACTRDPSRWARFWH
                     SGPGQVLTYLLLPCTLPFEYIYFRSRRLVVWLPDVPADLWWMQGLLRNMALEVFSRTK
                     AQLLGPISPPATRVLETSPLQPQIAPHREELGPTHQA"
BASE COUNT          351 a          645 c          573 g          377 t
ORIGIN      
        1 cggagtgacc cttcctcgtc ccgatcaccc cgcccggtcc acccgccatg ggcttcttag
       61 aggaggaggg cagatggaac ctgtccttct ccggcgccgg ctacctgggc gcccaccacg
      121 tgggcgccac cgaatgcctg cgccagcgag ccccgcgcct cctccagggc gcccgccgca
      181 tctacggttc ctcgtctggg gcgctcaacg cagtcagcat cgtctgcggc aagtcggtcg
      241 acttctgctg ctcccacctc ctgggcatgg ttgggcagtt ggagcggctg agcctaagca
      301 tcctgcaccc ggcctacgcg cccatcgagc acgtcaagca gcagctgcag gatgctctgc
      361 cccccgacgc ccacgtcctg gcctcccagc ggctgggcat ttcgctgacc cgctggcctg
      421 acggacgcaa cttcttggtc actgacttcg ccacctgcga tgagctcatc caggccttgg
      481 tctgcacctt atactttcct ttctactgcg ggctgatccc ccccgagttc agaggggagc
      541 gctacatcga tggggctctg agcaacaact tgccctttgc agactgcccc tccaccatca
      601 cggtgtcgcc cttccatggg acagtggaca tctgccccca gagcacctcc cccaacctgc
      661 atgagctgaa cgtcttcaac ttcagcttcc aaatctccac tgagaacttc ttcctggggc
      721 tcatatgtct catacccccc agcctcgagg tagtggccga caactgcaga caaggctacc
      781 tggatgccct gaggttcctg gagagacgtg gactcaccaa ggaaccagtg ctatggacgc
      841 tggtgtctaa ggaaccccca gccccggctg acggaaactg ggatgctggc tgtgaccaac
      901 gctggaaggg gggcctgtct ctcaactgga aagtgcccca tgtgcaagtc aaggatgtac
      961 ccaactttga gcagctctca ccagagctgg aggctgcact gaagaaagca tgtacgaggg
     1021 atcccagccg gtgggcccgc ttctggcact cggggcctgg acaggtgctg acgtacctgc
     1081 tgctaccctg cacactgccc ttcgagtaca tctacttccg cagcagaagg ttggtggtgt
     1141 ggctgcccga tgtgccggcg gacttgtggt ggatgcaggg cctgctgagg aacatggccc
     1201 tcgaggtttt ctccaggacc aaggcccagc tccttgggcc catcagccct ccggccactc
     1261 gcgtcctgga aacaagcccc ctccaacccc agatagctcc tcatagagag gagctcgggc
     1321 ccacccacca ggcctgaggg ggccgagcag ggccagccca gtgactggtg tcccttgatt
     1381 cctgctctgg cctttgtcct gtgtgcccac atctgcccca gcgggaagag gccctgccaa
     1441 tctccgtgga gaccctgcag cttggagccc gttccttggg gcgcagcctg tcagcatgtc
     1501 cccggtcact gtgtacccag gtcacctgcc ctccctcttg ccccgtctca tcagggagag
     1561 aaaggaggac agccacagag acacatgtct tactttcaga atttccacgg ggggactagg
     1621 agggcagcat tgctggggag aggggctcct gttctgccgt ggagctgccc acggagcacc
     1681 tcacagaaga ttgagaaagt gcctgatgcc cgcgtcagag accagaggag ccaactgaga
     1741 tgatggggtg ggggtgctcc ccccagactt tctcagtcct gcagcggccc ttgggggtga
     1801 cccccggcat ctaccccact caggaaacct tgacttctga cttcctatca ggtccagagg
     1861 gtggaaggcc ctggcaggaa gcaggaggag gaggagaggg gggtccgggt cttttcagga
     1921 tcccagctgt gggtgcttct gttggg
//