LOCUS BC104803 3645 bp mRNA linear HUM 21-JUL-2006
DEFINITION Homo sapiens protein tyrosine phosphatase, non-receptor type 14,
mRNA (cDNA clone MGC:132463 IMAGE:8143806), complete cds.
ACCESSION BC104803
VERSION BC104803.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3645)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3645)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (13-SEP-2005) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Mike Brownstein, NIMH
cDNA Library Preparation: British Columbia Cancer Research Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRCB Plate: 3 Row: c Column: 4.
FEATURES Location/Qualifiers
source 1..3645
/db_xref="H-InvDB:HIT000337891"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:132463 IMAGE:8143806"
/tissue_type="Lung and heart, PCR rescued clones"
/clone_lib="NIH_MGC_315"
/note="Vector: pCR4-TOPO with reversed insert; Clone
identification sequence tag: CGAGCGTT"
gene 1..3645
/gene="PTPN14"
/gene_synonym="PEZ"
/gene_synonym="PTP36"
/db_xref="GeneID:5784"
/db_xref="HGNC:HGNC:9647"
/db_xref="MIM:603155"
CDS 61..3624
/gene="PTPN14"
/gene_synonym="PEZ"
/gene_synonym="PTP36"
/codon_start=1
/product="protein tyrosine phosphatase, non-receptor type
14"
/protein_id="AAI04804.1"
/db_xref="GeneID:5784"
/db_xref="HGNC:HGNC:9647"
/db_xref="MIM:603155"
/translation="MPFGLKLRRTRRYNVLSKNCFVTRIRLLDSNVIECTLSVESTGQ
ECLEAVAQRLELRETHYFGLWFLSKSQQARWVELEKPLKKHLDKFANEPLLFFGVMFY
VPNVSWLQQEATRYQYYLQVKKDVLEGRLRCTLDQVIRLAGLAVQADFGDYNQFDSQD
FLREYVLFPMDLALEEAVLEELTQKVAQEHKAHSGILPAEAELMYINEVERLDGFGQE
IFPVKDNHGNCVHLGIFFMGIFVRNRIGRQAVIYRWNDMGNITHNKSTILVELINKEE
TALFHTDDIENAKYISRLFATRHKFYKQNKICTEQSNSPPPIRRQPTWSRSSLPRQQP
YILPPVHVQCGEHYSETHTSQDSIFHGNEEALYCNSHNSLDLNYLNGTVTNGSVCSVH
SVNSLNCSQSFIQASPVSSNLSIPGSDIMRADYIPSHRHSAIIVPSYRPTPDYETVMR
QMKRGILHTDSQSQSLRNLNIINTHAYNQPEDLVYSQPEMRERHPYTVPYGPQGVYSN
KLVSPSDQRNPKNNVVPSKPGASAISHTVSTPELANMQLQGSHNYSTAHMLKNYLFRP
PPPYPRPRPATSTPDLASHRHKYVSGSSPDLVTRKVQLSVKTFQEDSSPVVHQSLQEV
SEPLTATKHHGTVNKRHSLEVMNSMVRGMEAMTLKSLHLPMARRNTLREQGPPEEGSG
SHEVPQLPQYHHKKTFSDATMLIHSSESEEEEEEAPESVPQIPMLREKMEYSAQLQAA
LARIPNKPPPEYPGPRKSVSNGALRQDQASLPPAMARARVLRHGPAKAISMSRTDPPA
VNGASLGPSISEPDLTSVKERVKKEPVKERPVSEMFSLEDSIIEREMMIRNLEKQKMA
GLEAQKRPLMLAALNGLSVARVSGREENRVDATRVPMDERFRTLKKKLEEGMVFTEYE
QIPKKKANGIFSTAALPENAERSRIREVVPYEENRVELIPTKENNTGYINASHIKVVV
GGAEWHYIATQGPLPHTCHDFWQMVWEQGVNVIAMVTAEEEGGRTKSHRYWPKLGSKH
SSATYGKFKVTTKFRTDSVCYATTGLKVKHLLSGQERTVWHLQYTDWPDHGCPEDVQG
FLSYLEEIQSVRRHTNSMLEGTKNRHPPIVVHCSAGVGRTGVLILSELMIYCLEHNEK
VEVPMMLRLLREQRMFMIQTIAQYKFVYQVLIQFLQNSRLI"
BASE COUNT 959 a 1003 c 983 g 700 t
ORIGIN
1 aggccatctc aggggcgtgt gcgccaggat aggcaggcgg cgtccgagga ccacatagcc
61 atgccttttg gtctgaagct ccgccggaca cggcgctaca acgtcctgag caagaactgc
121 tttgtcacac ggattcgcct gctggacagc aatgttatcg agtgcacgct gtcggtggaa
181 agcacagggc aagaatgcct ggaggctgtg gcccagaggc tggagctgcg agagacgcac
241 tactttggcc tttggtttct cagcaagagc cagcaagcac gatgggtgga gctggagaaa
301 cctctgaaga aacatctgga caaattcgct aatgagcctt tgcttttctt tggagtcatg
361 ttctatgtgc caaatgtgtc atggcttcag caagaggcca caagatatca gtattacctg
421 caagtcaaaa aagatgtgct tgaagggcga ttacgatgta cattggacca ggtgattcgg
481 ctagccggcc tagctgtgca agctgatttt ggagactata atcagtttga ttctcaagat
541 ttcctcagag agtatgtgct atttcctatg gatttggccc tggaagaggc tgttctggag
601 gagctgaccc agaaggtagc ccaagaacac aaagcccaca gtggaatcct gccagcagaa
661 gctgaactga tgtacatcaa tgaagttgaa cgtttggatg gatttggaca ggaaatcttc
721 cctgtaaagg acaatcatgg aaactgtgta caccttggca ttttctttat ggggattttc
781 gtgaggaaca gaattggaag acaagcggta atatacaggt ggaatgacat ggggaatatc
841 actcataaca agtcgaccat tctagtggag ctcatcaaca aagaagagac tgccctcttt
901 cacacggatg atatcgaaaa tgccaagtat atttctcggt tgtttgccac acgacacaag
961 ttttacaaac aaaacaaaat ctgcactgaa cagtcaaatt ctccaccccc catcagacgc
1021 cagcccacct ggagccggtc ctctctgccc aggcagcagc cgtacatcct gcctcccgtt
1081 cacgtccagt gtggtgagca ctactcggaa acgcacacct cgcaagacag catttttcat
1141 gggaatgaag aagccttgta ttgcaactct cacaacagcc tggacttaaa ttatttaaat
1201 ggcactgtca ccaatggcag cgtgtgtagc gttcacagcg tcaactccct caactgctcg
1261 caaagtttca tccaggcctc ccctgtatcc tccaacctca gtatccctgg gagtgacatc
1321 atgcgggccg actacatccc gagccaccgg cacagcgcga tcatcgtgcc ctcgtacagg
1381 ccaacccccg attatgagac agtcatgcgc cagatgaaga gggggatcct gcatacagac
1441 agccagagcc agtctctgag aaacctcaac attatcaaca cccatgccta caaccagcca
1501 gaggatctgg tgtacagcca accggagatg cgggagaggc acccctacac tgtcccttat
1561 gggccacagg gggtctacag caacaaactt gtcagtccat ctgaccagag gaacccaaag
1621 aataatgtgg taccaagcaa gccgggggca agcgccatct cgcacacggt gagcacccca
1681 gagctggcca acatgcagct gcagggcagc cataactaca gcacggccca catgcttaag
1741 aactatctct tcaggccacc gcccccctac ccacggccac gacctgccac cagcacccca
1801 gacctggcca gccaccgcca caagtacgtc agcggcagca gcccggacct ggtgacccgg
1861 aaggtgcagc tctcggtgaa gaccttccaa gaggacagct ctccggtggt tcatcagtct
1921 ctccaggagg tgagcgagcc cctcacggcc accaagcacc acggcactgt gaacaagcgc
1981 cacagcctgg aggtgatgaa cagcatggtg cggggcatgg aggccatgac gctcaagtcg
2041 ctccacctcc ccatggctcg ccgcaacacg ctccgggagc agggaccgcc cgaggagggg
2101 tcaggcagcc acgaggtccc ccagctccct cagtatcacc acaagaagac cttctctgat
2161 gccactatgc taatccacag cagcgagagt gaggaggagg aggaggaggc tccagaatcg
2221 gtgccccaga tccccatgct ccgggagaag atggagtaca gtgcccagct gcaggcggcc
2281 ctggcccgca tccccaacaa gcccccgcct gagtaccccg gtccaaggaa gagtgtgagc
2341 aatggggctc tgaggcagga ccaagccagc cttcctcccg ccatggccag agccagggtg
2401 ctgaggcatg ggccagccaa ggccatcagc atgtctcgga ctgacccgcc ggctgtcaac
2461 ggggcctctc tcggcccatc catctcggaa cccgacctga ctagtgtgaa ggagcgggtc
2521 aaaaaagagc ctgtgaagga gagacctgtg tctgaaatgt tttccctgga agacagcatt
2581 atagagagag agatgatgat caggaatcta gagaagcaga agatggcagg cctggaggca
2641 cagaagaggc cgctgatgtt ggcagcattg aatgggctct cggtggctcg agtctcaggg
2701 cgggaagaga atcgagttga tgccacccgg gttcccatgg acgagaggtt cagaaccctg
2761 aagaagaaac tagaagaggg aatggtgttc acagaatatg agcaaattcc aaagaaaaag
2821 gcgaatggca ttttcagcac agcagctctg ccagaaaacg ccgagcgcag ccgaatccgt
2881 gaagttgtcc cctatgagga gaatcgagta gagctgatac caaccaaaga aaataacaca
2941 ggatacatta atgcctccca catcaaggtg gtggttggcg gggcagaatg gcactacata
3001 gccacccagg ggcccctgcc acacacgtgc cacgacttct ggcagatggt gtgggagcag
3061 ggagtgaatg tgattgccat ggtcactgca gaggaggagg gtggacgaac caaaagccac
3121 cgatactggc ccaaactagg ttcaaagcac agctcagcca cctatggcaa gttcaaggtc
3181 accacgaagt ttcgaacgga ttctgtttgc tatgcaacca cgggcttgaa ggtcaagcac
3241 cttttgtctg ggcaagaaag gacggtgtgg catttacaat atactgactg gccagatcac
3301 ggctgtccag aggatgtcca aggattttta tcctacttgg aggagatcca gtcggtccgt
3361 cgccatacca acagcatgct ggaaggcacc aagaaccggc acccgcccat cgtggtccac
3421 tgtagtgctg gggtgggaag gaccggcgtg ctcattcttt ctgagctgat gatctactgc
3481 ttggaacata acgaaaaggt ggaagtgccc atgatgctga ggctcctcag ggagcagagg
3541 atgttcatga tccagactat cgctcagtac aagtttgtct accaagtcct catccagttc
3601 ctccaaaact ccagactcat ttaatcaccc caatccagct cctgg
//