LOCUS BC104665 830 bp mRNA linear HUM 03-NOV-2005 DEFINITION Homo sapiens mutS homolog 6 (E. coli), mRNA (cDNA clone IMAGE:6498529), partial cds. ACCESSION BC104665 VERSION BC104665.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 830) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 830) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (09-SEP-2005) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: NCI cDNA Library Preparation: Michael Brownstein / Ted Usdin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 61 Row: j Column: 11 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 4504190. FEATURES Location/Qualifiers source 1..830 /db_xref="H-InvDB:HIT000337815" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:6498529" /tissue_type="Pooled, 40 cell lines" /clone_lib="NIH_MGC_142" /lab_host="DH10B" /note="Vector: pDNR-LIB" gene 1..>830 /gene="MSH6" /gene_synonym="HNPCC5" /gene_synonym="HSAP" /db_xref="GeneID:2956" /db_xref="HGNC:HGNC:7329" /db_xref="IMGT/GENE-DB:7329" /db_xref="MIM:600678" CDS 75..>830 /gene="MSH6" /gene_synonym="HNPCC5" /gene_synonym="HSAP" /codon_start=1 /product="MSH6 protein" /protein_id="AAI04666.1" /db_xref="GeneID:2956" /db_xref="HGNC:HGNC:7329" /db_xref="IMGT/GENE-DB:7329" /db_xref="MIM:600678" /translation="MSRQSTLYSFFPKSPALSDANKASARASREGGRAAAAPGASPSP GGDAAWSEAGPGPRPLARSASPPKAKNLNGGLRRSVAPAAPTSCDFSPGDLVWAKMEG YPWWPCLVYNHPFDGTFIREKGKSVRVHVQFFDDSPTRGWVSKRLLKPYTGSKSKEAQ KGGHFYSAKPEILRAMQRADEALNKDKIKRLELAVCDEPSEPEEEEEMEVGTTYVTDK SEEDNEIESEEEVQPKTQGSRRSSRQKKKKKKKK" BASE COUNT 228 a 202 c 247 g 153 t ORIGIN 1 gggggccgcg cggtagatgc ggtgctttta ggagctccgt ccgacagaac ggttgggcct 61 tgccggctgt cggtatgtcg cgacagagca ccctgtacag cttcttcccc aagtctccgg 121 cgctgagtga tgccaacaag gcctcggcca gggcctcacg cgaaggcggc cgtgccgccg 181 ctgcccccgg ggcctctcct tccccaggcg gggatgcggc ctggagcgag gctgggcctg 241 ggcccaggcc cttggcgcgc tccgcgtcac cgcccaaggc gaagaacctc aacggagggc 301 tgcggagatc ggtagcgcct gctgccccca ccagttgtga cttctcacca ggagatttgg 361 tttgggccaa gatggagggt tacccctggt ggccttgtct ggtttacaac cacccctttg 421 atggaacatt catccgcgag aaagggaaat cagtccgtgt tcatgtacag ttttttgatg 481 acagcccaac aaggggctgg gttagcaaaa ggcttttaaa gccatataca ggttcaaaat 541 caaaggaagc ccagaaggga ggtcattttt acagtgcaaa gcctgaaata ctgagagcaa 601 tgcaacgtgc agatgaagcc ttaaataaag acaagattaa gaggcttgaa ttggcagttt 661 gtgatgagcc ctcagagcca gaagaggaag aagagatgga ggtaggcaca acttacgtaa 721 cagataagag tgaagaagat aatgaaattg agagtgaaga ggaagtacag cctaagacac 781 aaggatctag gcgaagtagc cgccaaaaaa aaaaaaaaaa aaaaaaaaaa //