LOCUS BC104632 1305 bp mRNA linear HUM 11-APR-2007
DEFINITION Homo sapiens AT rich interactive domain 4B (RBP1-like), mRNA (cDNA
clone IMAGE:4592624), partial cds.
ACCESSION BC104632
VERSION BC104632.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1305)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1305)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (09-SEP-2005) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: CLONTECH
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 61 Row: c Column: 17
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 22035676.
FEATURES Location/Qualifiers
source 1..1305
/db_xref="H-InvDB:HIT000337782"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4592624"
/tissue_type="Kidney"
/clone_lib="NIH_MGC_75"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..>1305
/gene="ARID4B"
/gene_synonym="BCAA"
/gene_synonym="BRCAA1"
/gene_synonym="RBBP1L1"
/gene_synonym="SAP180"
/db_xref="GeneID:51742"
/db_xref="HGNC:HGNC:15550"
/db_xref="MIM:609696"
CDS 8..>1305
/gene="ARID4B"
/gene_synonym="BCAA"
/gene_synonym="BRCAA1"
/gene_synonym="RBBP1L1"
/gene_synonym="SAP180"
/codon_start=1
/product="ARID4B protein"
/protein_id="AAI04633.1"
/db_xref="GeneID:51742"
/db_xref="HGNC:HGNC:15550"
/db_xref="MIM:609696"
/translation="MKALDEPPYLTVGTDVSAKYRGAFCEAKIKTAKRLVKVKVTFRH
DSSTVEVQDDHIKGPLKVGAIVEVKNLDGAYQEAVINKLTDASWYTVVFDDGDEKTLR
RSSLCLKGERHFAESETLDQLPLTNPEHFGTPVIGKKTNRGRRSNHIPEEESSSSSSD
EDEDDRKQIDELLGKVVCVDYISLDKKKALWFPALVVCPDCSDEIAVKKDNILVRSFK
DGKFTSVPRKDVHEITSDTAPKPDAVLKQAFEQALEFHKSRTIPANWKTELKEDSSSS
EAEEEEEEEDDEKEKEDNSSEEEEEIEPFPEERENFLQQLYKFMEDRGTPINKRPVLG
YRNLNLFKLFRLVHKLGGFDNIESGAVWKQVYQDLGIPVLNSAAGYNVKCAYKKYLYG
FEEYCRSANIEFQMALPEKVVNKQCKECENAKKKKKKKKK"
BASE COUNT 479 a 197 c 302 g 327 t
ORIGIN
1 gggcatcatg aaggcccttg atgagcctcc ctatttgaca gtgggcactg atgtgagtgc
61 taaatacaga ggagcctttt gtgaagccaa gatcaagaca gcaaaaagac ttgtcaaagt
121 caaggtgaca tttagacatg attcttcaac agtggaagtt caggatgacc acataaaggg
181 cccactaaag gtaggagcta ttgtggaagt gaagaatctt gatggtgcat atcaggaagc
241 tgttatcaat aaactaacag atgcgagttg gtacactgta gtttttgatg acggagatga
301 gaagacactg agacgatctt cactgtgcct gaaaggagag aggcattttg ctgaaagtga
361 aacattagac cagctcccac tcaccaaccc tgagcatttt ggcactccag tcataggaaa
421 gaaaacaaat agaggaagaa gatctaatca tataccagag gaagagtctt catcatcctc
481 cagtgatgaa gatgaggatg ataggaaaca gattgatgag ctactaggca aagttgtatg
541 tgtagattac attagtttgg ataaaaagaa agcactgtgg tttcctgcat tggtggtttg
601 tcctgattgt agtgatgaga ttgctgtaaa aaaggacaat attcttgttc gatctttcaa
661 agatggaaaa tttacttcag ttccaagaaa agatgtccat gaaattacta gtgacactgc
721 accaaagcct gatgctgttt taaagcaagc ctttgaacag gcacttgaat ttcacaaaag
781 tagaactatt cctgctaact ggaagactga attgaaagaa gatagctcta gcagtgaagc
841 agaggaagaa gaggaggagg aagatgatga aaaagaaaag gaggataata gcagtgaaga
901 agaagaagaa atagaaccat ttccagaaga aagggagaac tttcttcagc aattgtacaa
961 atttatggaa gatagaggta cacctattaa caaacgacct gtacttggat atcgaaattt
1021 gaatctcttt aagttattca gacttgtaca caaacttgga ggatttgata atattgaaag
1081 tggagctgtt tggaaacaag tctaccaaga tcttggaatc cctgtcttaa attcagctgc
1141 aggatacaat gttaaatgtg cttataaaaa atacttatat ggttttgagg agtactgtag
1201 atcagccaac attgaatttc agatggcatt gccagagaaa gttgttaaca agcaatgtaa
1261 ggagtgtgaa aatgcaaaaa aaaaaaaaaa aaaaaaaaaa aaaaa
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