LOCUS BC104480 420 bp mRNA linear HUM 09-DEC-2005
DEFINITION Homo sapiens DEAD (Asp-Glu-Ala-Asp) box polypeptide 27, mRNA (cDNA
clone IMAGE:6387875), partial cds.
ACCESSION BC104480
VERSION BC104480.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 420)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 420)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (07-SEP-2005) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: NCI
cDNA Library Preparation: Michael Brownstein / Ted Usdin
Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 61 Row: h Column: 15
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 19743936.
FEATURES Location/Qualifiers
source 1..420
/db_xref="H-InvDB:HIT000337774"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:6387875"
/tissue_type="Pooled, 40 cell lines"
/clone_lib="NIH_MGC_141"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..>420
/gene="DDX27"
/gene_synonym="dJ686N3.1"
/gene_synonym="DKFZp667N057"
/gene_synonym="FLJ12917"
/gene_synonym="FLJ20596"
/gene_synonym="FLJ22238"
/gene_synonym="HSPC259"
/gene_synonym="MGC1018"
/gene_synonym="PP3241"
/gene_synonym="RHLP"
/gene_synonym="Rrp3p"
/db_xref="GeneID:55661"
/db_xref="HGNC:HGNC:15837"
/db_xref="IMGT/GENE-DB:15837"
/db_xref="MIM:15837"
CDS 12..>420
/gene="DDX27"
/gene_synonym="dJ686N3.1"
/gene_synonym="DKFZp667N057"
/gene_synonym="FLJ12917"
/gene_synonym="FLJ20596"
/gene_synonym="FLJ22238"
/gene_synonym="HSPC259"
/gene_synonym="MGC1018"
/gene_synonym="PP3241"
/gene_synonym="RHLP"
/gene_synonym="Rrp3p"
/codon_start=1
/product="DDX27 protein"
/protein_id="AAI04481.1"
/db_xref="GeneID:55661"
/db_xref="HGNC:HGNC:15837"
/db_xref="IMGT/GENE-DB:15837"
/db_xref="MIM:15837"
/translation="MVLAQRRRGGCEKLRAGPQAVLASGSGFCDNMLADLGLIGTIGE
DDEVPVEPESDSGDEEEEGPIVLGRRQKALGKNRSADFNPDFVFTEKEGTYDGSWALA
DVMSQLKKKRAATTLDEKIEKVRKKRKKKKKKKK"
BASE COUNT 129 a 84 c 138 g 69 t
ORIGIN
1 gggggtgacg catggtactt gcgcaaagac gacgaggagg ctgcgaaaag ttaagggccg
61 gaccgcaggc tgtgctcgct tccggaagtg gcttctgcga caacatgctt gcggacctcg
121 gcttaatcgg aaccataggc gaggatgacg aggtgccggt ggagcccgag tctgactccg
181 gggacgagga agaggagggg cccattgtgc tgggcagacg acaaaaagct ttggggaaga
241 accgcagtgc tgatttcaac cctgatttcg ttttcactga gaaggagggg acgtacgatg
301 gcagctgggc cctggctgat gtcatgagcc aactcaagaa gaagagggca gccactacat
361 tagatgagaa gattgagaaa gttcgaaaga aaaggaaaaa aaaaaaaaaa aaaaaaaaaa
//