LOCUS BC104239 559 bp mRNA linear HUM 04-OCT-2006 DEFINITION Homo sapiens agouti signaling protein, nonagouti homolog (mouse), mRNA (cDNA clone MGC:126093 IMAGE:40033056), complete cds. ACCESSION BC104239 VERSION BC104239.2 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 559) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 559) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (07-SEP-2005) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Oct 4, 2006 this sequence version replaced BC104239.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Baylor Human Genome Sequencing Center cDNA Library Preparation: Baylor Human Genome Sequencing Center cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAM Plate: 14 Row: e Column: 14. FEATURES Location/Qualifiers source 1..559 /db_xref="H-InvDB:HIT000337687" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:126093 IMAGE:40033056" /tissue_type="PCR rescued clones" /clone_lib="NIH_MGC_283" /note="Vector: pCR-Blunt II-TOPO with reversed insert; Clone identification sequence tag: CTCCA sequenced from the forward primer" gene 1..559 /gene="ASIP" /gene_synonym="AGSW" /gene_synonym="AGTI" /gene_synonym="ASP" /db_xref="GeneID:434" /db_xref="HGNC:HGNC:745" /db_xref="MIM:600201" CDS 3..401 /gene="ASIP" /gene_synonym="AGSW" /gene_synonym="AGTI" /gene_synonym="ASP" /codon_start=1 /product="agouti signaling protein, nonagouti homolog (mouse)" /protein_id="AAI04240.1" /db_xref="GeneID:434" /db_xref="HGNC:HGNC:745" /db_xref="MIM:600201" /translation="MDVTRLLLATLLVFLCFFTANSHLPPEEKLRDDRSLRSNSSVNL LDVPSVSIVALNKKSKQIGRKAAEKKRSSKKEASMKKVVRPRTPLSAPCVATRNSCKP PAPACCDPCASCQCRFFRSACSCRVLSLNC" BASE COUNT 111 a 184 c 164 g 100 t ORIGIN 1 ggatggatgt cacccgctta ctcctggcca ccctgctggt cttcctctgc ttcttcactg 61 ccaacagcca cctgccacct gaggagaagc tccgagatga caggagcctg agaagcaact 121 cctctgtgaa cctactggat gtcccttctg tctctattgt ggcgctgaac aagaaatcca 181 aacagatcgg cagaaaagca gcagaaaaga aaagatcttc taagaaggag gcttcgatga 241 agaaagtggt gcggccccgg acccccctat ctgcgccctg cgtggccacc cgcaacagct 301 gcaagccgcc ggcacccgcc tgctgcgacc cgtgcgcctc ctgccagtgc cgcttcttcc 361 gcagcgcctg ctcctgccgc gtgctcagcc tcaactgctg agcgccccca ctcccggccg 421 cgagcaggca gggcttcggg gacgcggggc gcttctcggg cgggtgatcc ctaacagggc 481 ggcttcccag ggctgcaggc gggcggaggt tccaggagat gggacttcag ggagacctgg 541 cttgggctaa aatcgaaat //