LOCUS       BC103938                2936 bp    mRNA    linear   HUM 04-OCT-2006
DEFINITION  Homo sapiens LIM homeobox 6, mRNA (cDNA clone MGC:119545
            IMAGE:40008211), complete cds.
ACCESSION   BC103938
VERSION     BC103938.1
KEYWORDS    MGC.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 2936)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   2  (bases 1 to 2936)
  CONSRTM   NIH MGC Project
  TITLE     Direct Submission
  JOURNAL   Submitted (07-SEP-2005) National Institutes of Health, Mammalian
            Gene Collection (MGC), Bethesda, MD 20892-2590, USA
  REMARK    NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT     Contact: MGC help desk
            Email: cgapbs-r@mail.nih.gov
            Tissue Procurement: Baylor Human Genome Sequencing Center
            cDNA Library Preparation: Baylor Human Genome Sequencing Center
            cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
            DNA Sequencing by: Sequencing Group at the Stanford Human Genome
            Center, Stanford University School of Medicine, Stanford, CA  94305
            Web site:       http://www-shgc.stanford.edu
            Contact:  (Dickson, Mark) mcd@paxil.stanford.edu
            Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
            R. M.
            
            Clone distribution: MGC clone distribution information can be found
            through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
            Series: IRAM Plate: 7 Row: f Column: 12.
FEATURES             Location/Qualifiers
     source          1..2936
                     /db_xref="H-InvDB:HIT000337490"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /clone="MGC:119545 IMAGE:40008211"
                     /tissue_type="PCR rescued clones"
                     /clone_lib="NIH_MGC_283"
                     /note="Vector: pCR-Blunt II-TOPO with reversed insert;
                     Clone identification sequence tag: CACA sequenced from the
                     forward primer"
     gene            1..2936
                     /gene="LHX6"
                     /gene_synonym="LHX6.1"
                     /db_xref="GeneID:26468"
                     /db_xref="HGNC:HGNC:21735"
                     /db_xref="MIM:608215"
     CDS             19..1107
                     /gene="LHX6"
                     /gene_synonym="LHX6.1"
                     /codon_start=1
                     /product="LIM homeobox 6"
                     /protein_id="AAI03939.1"
                     /db_xref="GeneID:26468"
                     /db_xref="HGNC:HGNC:21735"
                     /db_xref="MIM:608215"
                     /translation="MAQPGSGCKATTRCLEGTAPPAMAQSDAEALAGALDKDEGQASP
                     CTPSTPSVCSPPSAASSVPSAGKNICSSCGLEILDRYLLKVNNLIWHVRCLECSVCRT
                     SLRQQNSCYIKNKEIFCKMDYFSRFGTKCARCGRQIYASDWVRRARGNAYHLAFACFS
                     CKRQLSTGEEFGLVEEKVLCRIHYDTMIENLKRAAENGNGLTLEGAVPSEQDSQPKPA
                     KRARTSFTAEQLQVMQAQFAQDNNPDAQTLQKLADMTGLSRRVIQVWFQNCRARHKKH
                     TPQHPVPPSGAPPSRLPSALSDDIHYTPFSSPERARMVTLHGYIESQVQCGQVHCRLP
                     YTAPPVHLKADMDGPLSNRGEKVILFQY"
BASE COUNT          679 a          869 c          766 g          622 t
ORIGIN      
        1 cccgccaccg accaggtgat ggcccagcca gggtccggct gcaaagcgac cacccgctgt
       61 cttgaaggga ccgcgccgcc cgccatggct cagtctgacg ccgaggccct ggcaggagct
      121 ctggacaagg acgagggtca ggcctcccca tgtacgccca gcacgccatc tgtctgctca
      181 ccgccctctg ccgcctcctc cgtgccgtct gcaggcaaga acatctgctc cagctgcggc
      241 ctcgagatcc tggaccgata tctgctcaag gtcaacaacc tcatctggca cgtgcggtgc
      301 ctcgagtgct ccgtgtgtcg cacgtcgctg aggcagcaga acagctgcta catcaagaac
      361 aaggagatct tctgcaagat ggactacttc agccgattcg ggaccaagtg tgcccggtgc
      421 ggccgacaga tctacgccag cgactgggtg cggagagctc gcggcaacgc ctaccacctg
      481 gccttcgcct gcttctcgtg caagcgccag ctgtccactg gtgaggagtt cggcctggtc
      541 gaggagaagg tgctctgccg catccactac gacaccatga ttgagaacct caagagggcc
      601 gccgagaacg ggaacggcct cacgttggag ggggcagtgc cctcggaaca ggacagtcaa
      661 cccaagccgg ccaagcgcgc gcggacgtcc ttcaccgcgg aacagctgca ggttatgcag
      721 gcgcagttcg cgcaggacaa caaccccgac gctcagacgc tgcagaagct ggcggacatg
      781 acgggcctca gccggagagt catccaggtg tggtttcaaa actgccgggc gcgtcataaa
      841 aagcacacgc cgcaacaccc agtgccgccc tcgggggcgc ccccgtcccg ccttccctcc
      901 gccctgtccg acgacatcca ctacaccccg ttcagcagcc ccgagcgggc gcgcatggtc
      961 accctgcacg gctacattga gagtcaggta cagtgcgggc aggtgcactg ccggctgcct
     1021 tacaccgcac cccccgtcca cctcaaagcc gatatggatg ggccgctctc caaccggggt
     1081 gagaaggtca tcctttttca gtactaacgc tgccggcact tccgcatctg cccgtgggcg
     1141 ccccacagct gcccctcagc cgctgagatc cagtgtccaa gctgcggcca ggagtccacc
     1201 cacctccgca tccacccccg tccgccatcc tgcccaccac caggtcggtt cccgaggcct
     1261 ggcctttccc tctcctgctg agaaccagaa cccaccagga gcaccacaga gtcctcctct
     1321 tggaaggcag aactccctga aatctggaat cagggtggaa acagcctgtt tttcccattt
     1381 aaacaggagt cctcttcaac ttcagctgat tacaataaca aaaggcggaa ttgaattgtg
     1441 cgatgccaac ggccttctca tttacaggtt tttttccccc acattggcct ttatttacta
     1501 cttccttgga accatctctg aattctgaat agctgacaac ccccaatgtt atccactctg
     1561 ttgcttttgt ctggaaaact ctacagtgtt tgtgggatgt ccccaaagga aagctatgtt
     1621 ctaattttat catttccatc tgtctggtta tgtcaagtta attcagaaag agaagagaca
     1681 gtgaccaacc ctgagaggcc taatagggca gagatggagg cctgcccaga ctaggaggca
     1741 gcggggatag acagggaatg gggagaagaa agacccccat tggtttggaa atcaaggaga
     1801 gggcggtgac atattggacc agaagaggca ctagccattt taaggagagg aaagagaaaa
     1861 ctctggggtc agggagagac cctaccccca cctaattatc cagcatatat gtaagaaaca
     1921 tagcagcgat ggtattcgat ctgtgccatg actcttctga atgtttggac aggttagagt
     1981 tggggacccc tgttggccac ttgttgacct ctcatagtgg tgcttgggcc aggtcttctc
     2041 aatggaaggg gaatccctta taggggagag ggaacagagc ccagtgaaat ggcagtcaga
     2101 atgttaaccc tggatccatc tctaagtaga gagagggtgc ccattgccta ggtgagtgtg
     2161 ccaagctcag gattccaact ggtgcctctg agcttcccaa tcaatacttc ctggagccag
     2221 ccccacccac ccctgagaac agaggtcaga cacagctgcg taacatccat cctgctacaa
     2281 ctcttccacc ccaaacaaaa gggctcaggc tacacacgac catgatttat gttttcaggg
     2341 gatgcccatt tgtcccaagc ttatcctgta attctagaat tacctggtgt cctgatgcat
     2401 tttccactag aggttgctaa tcagcatgtt ttagcccaag tccaccttcc tgctgtggtt
     2461 aacctgttat gttgcttttg gaaggagact ctaagacagg gaaagcaagt tcatggtaca
     2521 tacgcagcca ttgtctctgt ttttacccat ggcagacatt gctaatcaat ggcagctcta
     2581 tttcactgag tctggataag gtttcagagt tcaaatgctt gacgttggca cttaacatga
     2641 aagcctatag gtcattcttg ctctgggatc tacaggcagg gtaggcacag gtgcagccta
     2701 agaagggaac ctgcttcctc tcccttccaa agacagtgac agctgactga gggcaaagag
     2761 caggcaccac tcagaacgtg gtgagtacag ctcagctcag cactcagtca gtggtaactt
     2821 gtgcccagcc ctgtgctagg cgctgacatt aacaggagca accagggccc aattcctggc
     2881 cttggagctc aaatctttcc tttgattttt gctcctgatc atcaaggccc cagtgg
//