LOCUS BC103935 2748 bp mRNA linear HUM 04-OCT-2006
DEFINITION Homo sapiens aldehyde dehydrogenase 1 family, member L2, mRNA (cDNA
clone MGC:119537 IMAGE:40008176), complete cds.
ACCESSION BC103935
VERSION BC103935.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2748)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2748)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (07-SEP-2005) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Baylor Human Genome Sequencing Center
cDNA Library Preparation: Baylor Human Genome Sequencing Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAM Plate: 7 Row: f Column: 14.
FEATURES Location/Qualifiers
source 1..2748
/db_xref="H-InvDB:HIT000337487"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:119537 IMAGE:40008176"
/tissue_type="PCR rescued clones"
/clone_lib="NIH_MGC_283"
/note="Vector: pCR-Blunt II-TOPO with reversed insert;
Clone identification sequence tag: CTATCA sequenced from
the forward primer"
gene 1..2748
/gene="ALDH1L2"
/gene_synonym="FLJ38508"
/db_xref="GeneID:160428"
/db_xref="HGNC:HGNC:26777"
CDS 805..2271
/gene="ALDH1L2"
/gene_synonym="FLJ38508"
/codon_start=1
/product="ALDH1L2 protein"
/protein_id="AAI03936.1"
/db_xref="GeneID:160428"
/db_xref="HGNC:HGNC:26777"
/translation="MVTFYGSTLLNSSVPPGEPLEIKGAKKPGLVTKNGLVLFGNDGK
ALTVRNLQFEDGKMIPASQYFSTGETSVVELTAEEVKVAETIKVIWAGILSNVPIIED
STDFFKSGASSMDVARLVEEIRQKCGGLQLQNEDVYMATKFEGFIQKVVRKLRGEDQE
VELVVDYISKEVNEIMVKMPYQCFINGQFTDADDGKTYDTINPTDGSTICKVSYASLA
DVDKAVAAAKDAFENGEWGRMNARERGRLMYRLADLLEENQEELATIEALDSGAVYTL
ALKTHIGMSVQTFRYFAGWCDKIQGSTIPINQARPNRNLTFTKKEPLGVCAIIIPWNY
PLMMLAWKSAACLAAGNTLVLKPAQVTPLTALKFAELSVKAGFPKGVINIIPGSGGIA
GQRLSEHPDIRKLGFTGSTPIGKQIMKSCAVSNLKKVSLELGGKSPLIIFNDCELDKA
VRMGMGAVFFNKGENCIAAGRLFVEESIHDEFVTRVIH"
BASE COUNT 806 a 565 c 704 g 673 t
ORIGIN
1 agtgctagcg ctcctctcca gcatgctgcg gcggggcagc caggcgctcc ggcgcttctc
61 cactggccgg gtttatttca aaaacaagct gaagttggca ctaattggcc agagcctctt
121 tggacaagaa gtctatagcc acctccgcaa agagggccac cgagtagtag gggtgttcac
181 agttccagac aaggatggaa aagctgaccc tctggctttg gctgcagaga aagatgggac
241 ccctgtgttc aagcttccta aatggagggt caagggcaag accatcaaag aagtggcaga
301 agcctacaga tccgtgggtg cagagctaaa tgtgctccct ttctgcactc agttcattcc
361 catggatata attgatagtc caaagcacgg ctctatcatt tatcacccat ccatcctgcc
421 caggcacaga ggagcctctg ctatcaattg gactctaatt atgggagata agaaagctgg
481 gttttctgtt ttctgggctg atgatggctt ggatacagga cccatccttc ttcagagatc
541 atgtgatgtt gaacccaatg atacagtgga tgcactttat aatcggtttc tttttcctga
601 aggaatcaag gccatgaagc tgtccaactc atagctgatg gaaaagctcc tcgtataccc
661 cagccagaag aaggggcaac atatgaaggt atccagaaaa aggaaaatgc tgagatttct
721 tgggaccagt ctgccgaagt tttacataac tggattcgag gtcatgataa agtccctgga
781 gcttggacag agataaatgg acagatggtc actttctatg gctcgacatt actgaatagc
841 tctgtgcctc ctggagaacc actggaaatt aaaggtgcca agaagcctgg tctcgttacc
901 aaaaatggac ttgttctttt tggtaacgat ggaaaagcac tgacggtgag aaatctgcag
961 tttgaagatg gaaaaatgat ccctgcctct cagtactttt caacgggtga gacgtcagtg
1021 gtagaactga cagctgaaga ggtgaaagtg gcagagacca tcaaggtcat ctgggctgga
1081 attttaagca atgtccccat tattgaagac tcaacagact tctttaaatc tggagcaagc
1141 tcaatggatg ttgccaggct ggttgaagag atcagacaga aatgtggtgg gcttcagttg
1201 cagaatgaag atgtctatat ggccaccaag tttgaaggct ttatccaaaa ggtcgtgagg
1261 aaactgagag gagaagatca agaggtggag ctggttgtag attatatttc aaaggaggtc
1321 aatgaaatca tggtaaaaat gccataccag tgtttcataa atggacagtt cacagatgca
1381 gacgatggaa agacttacga cactatcaac ccaacagatg gatctacaat atgcaaagta
1441 tcctacgctt ctttggcgga tgttgataaa gcagtagcag cagcaaaaga tgcttttgaa
1501 aacggtgaat ggggaagaat gaatgcaaga gaaagaggaa gattgatgta tagacttgca
1561 gacctactgg aagagaacca agaagagctg gcaactattg aagcccttga ttcaggggct
1621 gtctatacct tggccctgaa gacacacatt ggaatgtctg tgcaaacatt cagatatttt
1681 gctggctggt gcgacaaaat tcagggttct actattccaa tcaaccaggc ccgtccaaat
1741 cgcaatctga ccttcaccaa gaaagagcca ctcggtgtct gtgccattat tattccctgg
1801 aactacccgc tgatgatgct ggcatggaag agtgctgcgt gtttggcagc aggcaatacc
1861 ttagtgctca agccagcaca ggtcacgccc ttgactgctt tgaagtttgc agaactgtct
1921 gtgaaagcag gctttccaaa gggggtcatc aacatcattc caggctcagg tggcatagca
1981 ggacaacgtc tgtctgaaca tcctgacatc cgcaaacttg gtttcactgg atccactcct
2041 attggcaaac agatcatgaa gagctgtgct gttagcaact tgaagaaagt ttcccttgag
2101 cttggtggca agtctccact tataatattt aatgactgtg aacttgacaa ggctgtgcga
2161 atgggcatgg gagcagtatt tttcaacaaa ggagagaact gtattgctgc tgggcggttg
2221 ttcgtggaag aatccatcca cgacgaattt gtgacaagag tgatccactg atcatgggcc
2281 ccaaaatcat aaggctcatc tggaaaagct gctgcaatac tgtgaaactg gagtgaaaga
2341 aggggccact ttggtgtacg ggggaagaca agtccaaagg ccaggctttt tcatggagcc
2401 gaccgtgttc acagatgtgg aagactacat gtacctcgcc aaagaggaat cctttgggcc
2461 tattatggtc atttctaaat tccaaaatgg ggacatcgat ggagtgttgc agcgagcaaa
2521 tagtacagag tatggtttgg cctcaggggt ttttacaaga gacataaaca aagctatgta
2581 tgtgagtgaa aaactggaag caggaactgt ttttattaac acatacaaca agacagatgt
2641 ggcggcccca tttggcggag ttaaacaatc tggctttgga aaagacttag gtgaggaagc
2701 tctaaatgaa tatctcaaaa ccaagacggt gacactggaa tattagta
//