LOCUS BC103917 1921 bp mRNA linear HUM 04-OCT-2006
DEFINITION Homo sapiens keratin 71, mRNA (cDNA clone MGC:119390
IMAGE:40006780), complete cds.
ACCESSION BC103917
VERSION BC103917.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1921)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1921)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (07-SEP-2005) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Baylor Human Genome Sequencing Center
cDNA Library Preparation: Baylor Human Genome Sequencing Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAM Plate: 5 Row: g Column: 19.
FEATURES Location/Qualifiers
source 1..1921
/db_xref="H-InvDB:HIT000337469"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:119390 IMAGE:40006780"
/tissue_type="PCR rescued clones"
/clone_lib="NIH_MGC_283"
/note="Vector: pCR-Blunt II-TOPO with reversed insert;
Clone identification sequence tag: TAAAATAT sequenced from
the forward primer"
gene 1..1921
/gene="KRT71"
/gene_synonym="K6IRS1"
/gene_synonym="KRT6IRS"
/gene_synonym="KRT6IRS1"
/db_xref="GeneID:112802"
/db_xref="HGNC:HGNC:28927"
/db_xref="MIM:608245"
CDS 21..1592
/gene="KRT71"
/gene_synonym="K6IRS1"
/gene_synonym="KRT6IRS"
/gene_synonym="KRT6IRS1"
/codon_start=1
/product="keratin 71"
/protein_id="AAI03918.1"
/db_xref="GeneID:112802"
/db_xref="HGNC:HGNC:28927"
/db_xref="MIM:608245"
/translation="MSRQFTCKSGAAAKGGFSGCSAVLSGGSSSSFRAGSKGLSGGFG
SRSLYSLGGVRSLNVASGSGKSGGYGFGRGRASGFAGSMFGSVALGPVCPTVCPPGGI
HQVTVNESLLAPLNVELDPEIQKVRAQEREQIKALNNKFASFIDKVRFLEQQNQVLET
KWELLQQLDLNNCKNNLEPILEGYISNLRKQLETLSGDRVRLDSELRNVRDVVEDYKK
RYEEEINKRTAAENEFVLLKKDVDAAYANKVELQAKVESMDQEIKFFRCLFEAEITQI
QSHISDMSVILSMDNNRNLDLDSIIDEVRTQYEEIALKSKAEAEALYQTKFQELQLAA
GRHGDDLKNTKNEISELTRLIQRIRSEIENVKKQASNLETAIADAEQRGDNALKDARA
KLDELEGALHQAKEELARMLREYQELMSLKLALDMEIATYRKLLESEECRMSGEFPSP
VSISIISSTSGGSGYGFRPSMVSGGYVANSSNCISGVCSVRGGEGRSRGSANDYKDTL
GKGSSLSAPSKKTSR"
BASE COUNT 433 a 561 c 583 g 344 t
ORIGIN
1 gctttgtctc caccagcaac atgagccgcc aattcacctg caagtcggga gctgccgcca
61 aggggggctt cagtggctgc tcagctgtgc tctcaggggg cagctcatcc tccttccggg
121 cagggagcaa agggctcagt gggggctttg gcagccggag cctctacagc ctggggggtg
181 tccggagcct caatgtggcc agtggcagcg ggaagagtgg aggctatgga tttggccggg
241 gccgggccag tggctttgct ggaagcatgt ttggcagtgt ggccctgggg cctgtgtgcc
301 caactgtatg cccacctgga ggcatccacc aggttaccgt caatgagagc ctcctggccc
361 ccctcaacgt ggagctggac cccgagatcc agaaagtgcg tgcccaggag cgagagcaga
421 tcaaggctct gaacaacaag ttcgcctcct tcatcgacaa ggtgcggttc ctggagcagc
481 agaaccaggt actggagacc aagtgggagc tgctgcagca gctggacctg aacaactgca
541 agaacaacct ggagcccatc ctcgagggct acatcagcaa cctgcggaag cagctggaga
601 cgctgtctgg ggacagggtg aggctggact cggagctgag gaatgtgcgg gacgtagtgg
661 aggactacaa gaagaggtat gaggaggaaa tcaacaagcg gacagcagca gagaacgagt
721 ttgtgctgct caagaaggat gtggatgctg cttacgccaa taaggtggaa ctgcaggcca
781 aggtggaatc catggaccag gagatcaagt tcttcaggtg tctctttgaa gccgagatca
841 ctcagatcca gtcccacatc agtgacatgt ctgtcatcct gtccatggac aacaaccgga
901 acctagacct ggacagcatc attgacgaag tccgcaccca gtatgaggag attgccttga
961 agagtaaggc cgaggctgag gccctgtacc agaccaagtt ccaagagctt cagctggcag
1021 ctggcaggca tggggacgac ctcaaaaaca ccaagaatga aatctcggag ctcactcggc
1081 tcatccagag aatccgctca gagatcgaga acgtgaagaa gcaggcttcc aacctggaga
1141 cagccatcgc tgatgctgag cagcggggag acaacgccct gaaggatgcc cgggccaagc
1201 tggacgagct ggagggcgcc ctgcaccagg ccaaggagga gctggcgcgg atgctgcgcg
1261 agtaccagga gctcatgagc ctgaagctgg ccctggacat ggagatcgcc acctatcgca
1321 agctactgga gagcgaggag tgcaggatgt caggagaatt tccctcccct gtcagcatct
1381 ccatcatcag cagcaccagt ggcggcagtg gctatggctt ccggcccagc atggtcagcg
1441 gtggctatgt ggccaacagc agcaactgca tctctggagt gtgcagcgtg agaggcgggg
1501 agggcaggag ccggggcagt gccaacgatt acaaagacac cctggggaag ggttccagcc
1561 tgagtgcacc ctccaagaaa accagtcggt agagaagact gccccgggcc ccgcctcatt
1621 ccatgacccg gctctggatc ccacactgta cttcccacag cccactctca gctccatctc
1681 caccctgctg gtcctgctcc catacacctg gcactggcct tggccaccca cttctcccag
1741 cctgtgtctt cctgatcctg ggaaggcctg gatgaccaag cttggtgaaa ttcctccctg
1801 tacacaccct attaactcct tggctgtggt cccccagcta caccaccagc ccaggtcctg
1861 gctgccagct ttcctcctct gcccggcctc tagcgcagtc gctaactact ctgctgggct
1921 c
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