LOCUS BC103888 1252 bp mRNA linear HUM 04-OCT-2006 DEFINITION Homo sapiens NHL repeat containing 1, mRNA (cDNA clone MGC:119262 IMAGE:40004980), complete cds. ACCESSION BC103888 VERSION BC103888.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1252) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1252) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (07-SEP-2005) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Baylor Human Genome Sequencing Center cDNA Library Preparation: Baylor Human Genome Sequencing Center cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAM Plate: 7 Row: c Column: 9. FEATURES Location/Qualifiers source 1..1252 /db_xref="H-InvDB:HIT000337440" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:119262 IMAGE:40004980" /tissue_type="PCR rescued clones" /clone_lib="NIH_MGC_282" /note="Vector: pCR-Blunt II-TOPO; Clone identification sequence tag: AGCACACC sequenced from the reverse primer" gene 1..1252 /gene="NHLRC1" /gene_synonym="bA204B7.2" /gene_synonym="EPM2A" /gene_synonym="EPM2B" /db_xref="GeneID:378884" /db_xref="HGNC:HGNC:21576" /db_xref="MIM:608072" CDS 15..1202 /gene="NHLRC1" /gene_synonym="bA204B7.2" /gene_synonym="EPM2A" /gene_synonym="EPM2B" /codon_start=1 /product="NHL repeat containing 1" /protein_id="AAI03889.1" /db_xref="GeneID:378884" /db_xref="HGNC:HGNC:21576" /db_xref="MIM:608072" /translation="MAAEASESGPALHELMREAEISLLECKVCFEKFGHRQQRRPRNL SCGHVVCLACVAALAHPRTLALECPFCRRACRGCDTSDCLPVLHLIELLGSALRQSPA AHRAAPSAPGALTCHHTFGGWGTLVNPTGLALCPKTGRVVVVHDGRRRVKIFDSGGGC AHQFGEKGDAAQDIRYPVDVTITNDCHVVVTDAGDRSIKVFDFFGQIKLVIGGQFSLP WGVETTPQNGIVVTDAEAGSLHLLDVDFAEGVLRRTERLQAHLCNPRGVAVSWLTGAI AVLEHPLALGTGVCSTRVKVFSSSMQLVGQVDTFGLSLYFPSKITASAVTFDHQGNVI VADTSGPAILCLGKPEEFPVPKPMVTHGLSHPVALTFTKENSLLVLDTASHSIKVYKV DWG" BASE COUNT 228 a 369 c 383 g 272 t ORIGIN 1 gcacaggacg cgccatggcg gccgaagcct cggagagcgg gccagcgctg catgagctca 61 tgcgcgaggc ggagatcagc ctgctcgagt gcaaggtgtg ctttgagaag tttggccacc 121 ggcagcagcg gcgcccgcgc aacctgtcct gcggccacgt ggtctgcctg gcctgcgtgg 181 ccgccctggc gcacccgcgc actctggccc tcgagtgccc attctgcagg cgagcttgcc 241 ggggctgcga caccagcgac tgcctgccgg tgctgcacct catagagctc ctgggctcag 301 cgcttcgcca gtccccggcc gcccatcgcg ccgcccccag cgcccccgga gccctcacct 361 gccaccacac cttcggcggc tgggggaccc tggtcaaccc caccggactg gcgctttgtc 421 ccaagacggg gcgtgtcgtg gtggtgcacg acggcaggag gcgtgtcaag atttttgact 481 cagggggagg atgcgcgcat cagtttggag agaaggggga cgctgcccaa gacattaggt 541 accctgtgga tgtcaccatc accaacgact gccatgtggt tgtcactgac gccggcgatc 601 gctccatcaa agtgtttgat ttttttggcc agatcaagct tgtcattgga ggccaattct 661 ccttaccttg gggtgtggag accacccctc agaatgggat tgtggtaact gatgcggagg 721 cagggtccct gcacctcctg gacgtcgact tcgcggaagg ggtccttcgg agaactgaaa 781 ggttgcaagc tcatctgtgc aatccccgag gggtggcagt gtcttggctc accggggcca 841 ttgcggtcct ggagcacccc ctggccctgg ggactggggt ttgcagcacc agggtgaaag 901 tgtttagctc aagtatgcag cttgtcggcc aagtggatac ctttgggctg agcctctact 961 ttccctccaa aataactgcc tccgctgtga cctttgatca ccagggaaat gtgattgttg 1021 cagatacatc tggtccagct atcctttgct taggaaaacc tgaggagttt ccagtaccga 1081 agcccatggt cactcatggt ctttcgcatc ctgtggctct taccttcacc aaggagaatt 1141 ctcttcttgt gctggacaca gcatctcatt ctataaaagt ctataaagtt gactgggggt 1201 gatgggctgg ggtgggtccc tggaatcaga agcactagtg ctgccattaa tg //