LOCUS BC103884 1279 bp mRNA linear HUM 04-OCT-2006
DEFINITION Homo sapiens serpin peptidase inhibitor, clade B (ovalbumin),
member 12, mRNA (cDNA clone IMAGE:40004898), complete cds.
ACCESSION BC103884
VERSION BC103884.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1279)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1279)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (07-SEP-2005) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Baylor Human Genome Sequencing Center
cDNA Library Preparation: Baylor Human Genome Sequencing Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAM Plate: 5 Row: e Column: 24
This clone has the following problem: The cds is short compared to
the longest cds in the locus.
FEATURES Location/Qualifiers
source 1..1279
/db_xref="H-InvDB:HIT000337436"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:40004898"
/tissue_type="PCR rescued clones"
/clone_lib="NIH_MGC_282"
/note="Vector: pCR-Blunt II-TOPO; Clone identification
sequence tag: ATAAAAAC sequenced from the reverse primer"
gene 1..1279
/gene="SERPINB12"
/gene_synonym="YUKOPIN"
/db_xref="GeneID:89777"
/db_xref="HGNC:HGNC:14220"
CDS 728..1279
/gene="SERPINB12"
/gene_synonym="YUKOPIN"
/codon_start=1
/product="SERPINB12 protein"
/protein_id="AAI03885.1"
/db_xref="GeneID:89777"
/db_xref="HGNC:HGNC:14220"
/translation="MMTQKGLYRIGFIEEVKAQILEMRYTKGKLSMFVLLPSHSKDNL
KGLEELERKITYEKMVAWSSSENMSEESVVLSFPRFTLEDSYDLNSILQDMGITDIFD
ETRADLTGISPSPNLYLSKIIHKTFVEVDENGTQAAAATGAVVSERSLRSWVEFNANH
PFLFFIRHNKTQTILFYGRVCSP"
BASE COUNT 391 a 277 c 290 g 321 t
ORIGIN
1 atggactctc ttgttacagc aaacaccaaa ttttgctttg atctttttca agagataggc
61 aaagatgatc gtcataaaaa catatttttc tctcccctga gcctctcagc tgcccttggt
121 atggtacgct tgggtgctag aagtgacagt gcacatcaga ttgatgaggt actacacttc
181 aacgaatttt cccagaatga aagcaaagaa cctgaccctt gtctgaaaag caacaaacaa
241 aaagtgctgg ctgacagctc tctggagggg cagaaaaaaa acgacagagc ctctggatca
301 gcaggctggg tccttaaaca atgagagcgg actggtcagc tgctactttg ggcagcttct
361 ctccaaatta gacaggatca agactgatta cacactgagt attgccaaca ggctttatgg
421 agagcaggaa ttcccaatct gtcaggaata cttagatggt gtgattcaat tttaccacac
481 gacgattgaa agtgttgatt tccaaaaaaa ccctgaaaaa tccagacaag agattaactt
541 ctgggttgaa tgtcaatccc aaggtaaaat caaggaactc ttcagcaagg acgctattaa
601 tgctgagact gtgctggtac tggtgaatgc tgtttacttc aaggccaaat gggaaacata
661 ctttgaccat gaaaacacgg tggatgcacc tttctgtcta aatgcgaatg aaaacaagag
721 tgtgaagatg atgacgcaaa aaggcctcta cagaattggc ttcatagagg aggtgaaggc
781 acagatcctg gaaatgaggt acaccaaggg gaagctcagc atgttcgtgc tgctgccatc
841 tcactctaaa gataacctga agggtctgga agagcttgaa aggaaaatca cctatgaaaa
901 aatggtggcc tggagcagct cagaaaacat gtcagaagaa tcggtggtcc tgtccttccc
961 ccggttcacc ctggaagaca gctatgatct caattccatt ttacaagaca tgggcattac
1021 ggatatcttt gatgaaacga gggctgatct tactggaatc tctccaagtc ccaatttgta
1081 cttgtcaaaa attatccaca aaacctttgt ggaggtggat gaaaacggta cccaggcagc
1141 tgcagccact ggggctgttg tctcggaaag gtcactacga tcttgggtgg agtttaatgc
1201 caaccaccct tttctctttt tcattagaca caacaaaacc caaaccattc tcttttatgg
1261 cagggtctgc tctccttaa
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