LOCUS BC103860 468 bp mRNA linear HUM 04-OCT-2006 DEFINITION Homo sapiens BRF1 homolog, subunit of RNA polymerase III transcription initiation factor IIIB (S. cerevisiae), mRNA (cDNA clone IMAGE:40003197), complete cds. ACCESSION BC103860 VERSION BC103860.2 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 468) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 468) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (07-SEP-2005) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Oct 4, 2006 this sequence version replaced BC103860.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Baylor Human Genome Sequencing Center cDNA Library Preparation: Baylor Human Genome Sequencing Center cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAM Plate: 5 Row: d Column: 9 This clone has the following problem: The cds is short compared to the longest cds in the locus. FEATURES Location/Qualifiers source 1..468 /db_xref="H-InvDB:HIT000337412" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:40003197" /tissue_type="PCR rescued clones" /clone_lib="NIH_MGC_283" /note="Vector: pCR-Blunt II-TOPO with reversed insert; Clone identification sequence tag: NA" gene 1..468 /gene="BRF1" /gene_synonym="BRF" /gene_synonym="hBRF" /gene_synonym="TAFIII90" /gene_synonym="TF3B90" /gene_synonym="TFIIIB90" /db_xref="GeneID:2972" /db_xref="HGNC:HGNC:11551" /db_xref="MIM:604902" CDS 144..320 /gene="BRF1" /gene_synonym="BRF" /gene_synonym="hBRF" /gene_synonym="TAFIII90" /gene_synonym="TF3B90" /gene_synonym="TFIIIB90" /codon_start=1 /product="BRF1 protein" /protein_id="AAI03861.1" /db_xref="GeneID:2972" /db_xref="HGNC:HGNC:11551" /db_xref="MIM:604902" /translation="MHDFRRTVKEVISVVKVCESTLRKRLTEFEDTPHRGGRADGGPR ASPGLFVGRPQYHS" BASE COUNT 92 a 138 c 150 g 88 t ORIGIN 1 ccgccaagga cacacccacc gaggccacag ctgcgatttc atagtgtggg accccactgg 61 caaagacacg ctggctgctg tggccgtggt ttctgtccca gccgtctgtt tccatagaaa 121 aagcgctcct ggttgcagcc agaatgcatg acttcaggag gactgtgaag gaggtcatca 181 gtgtggtcaa agtgtgtgag tccacgctgc ggaagaggct cacggaattt gaagacaccc 241 cccatcgagg agggagggca gacggaggcc cgagagcctc cccaggcctc ttcgtgggaa 301 ggccccagta ccactcgtag gaggtctcag ctctggcatg gctgccccgg atgtggccga 361 gggggcttca ccctgtgtcc ttaggagggg gtggccttga ggcagagccg tgcctcactg 421 acccccaggg gcctcatcct ccccatggaa tgggctgtat gtcctgca //