LOCUS BC103753 1614 bp mRNA linear HUM 21-JUL-2006
DEFINITION Homo sapiens RNA binding protein, autoantigenic (hnRNP-associated
with lethal yellow homolog (mouse)), mRNA (cDNA clone MGC:117312
IMAGE:6182358), complete cds.
ACCESSION BC103753
VERSION BC103753.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1614)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1614)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (07-SEP-2005) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Dr. James R. Lupski
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 232 Row: h Column: 18
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 21396479.
FEATURES Location/Qualifiers
source 1..1614
/db_xref="H-InvDB:HIT000337345"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:117312 IMAGE:6182358"
/tissue_type="Peripheral Nervous System, dorsal root
ganglion"
/clone_lib="Lupski_dorsal_root_ganglion"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1614
/gene="RALY"
/gene_synonym="P542"
/db_xref="GeneID:22913"
/db_xref="HGNC:HGNC:15921"
CDS 320..1243
/gene="RALY"
/gene_synonym="P542"
/codon_start=1
/product="RNA binding protein, autoantigenic
(hnRNP-associated with lethal yellow homolog (mouse))"
/protein_id="AAI03754.1"
/db_xref="GeneID:22913"
/db_xref="HGNC:HGNC:15921"
/translation="MSLKLQASNVTNKNDPKSINSRVFIGNLNTALVKKSDVETIFSK
YGRVAGCSVHKGYAFVQYSNERHARAAVLGENGRVLAGQTLDINMAGEPKPDRPKGLK
RAASAIYSGYIFDYDYYRDDFYDRLFDYRGRLSPVPVPRAVPVKRPRVTVPLVRRVKT
NVPVKLFARSTAVTTSSAKIKLKSSELQAIKTELTQIKSNIDALLSRLEQIAAEQKAN
PDGKKKGDGGGASGGGGGGGGSGGGGSGGGGGGGSSRPPAPQENTTSEAGLPQGEART
RDDGDEEGLLTHSEEELEHSQDTDADDGALQ"
BASE COUNT 357 a 496 c 492 g 269 t
ORIGIN
1 gccgctgtca gtgcggcggg gcgcgcgagc ggcgccagct cggggcagcg gaacccagag
61 aagctgaggg ggcggtagcg gcggcgacgg cgacgacgac gactcccgcg cgtgtgccca
121 gcctcttccc gccgcagccg cccttttcct ccctccctta cgtccccgag tgcggcagta
181 ccgcctcctt cccagccgcg cggcttcctc cagacctctc ggcgcgggtg agccctattc
241 ccagaggcag gtggtgctga ccctgtaacc caaaggagga aacagctggc taagctcatc
301 attgttactg gtggtcacca tgtccttgaa gcttcaggca agcaatgtaa ccaacaagaa
361 tgaccccaag tccatcaact ctcgagtctt cattggaaac ctcaacacag ctctggtgaa
421 gaaatcagat gtggagacca tcttctctaa gtatggccgt gtggccggct gttctgtgca
481 caagggctat gcctttgttc agtactccaa tgagcgccat gcccgggcag ctgtgctggg
541 agagaatggg cgggtgctgg ccgggcagac cctggacatc aacatggctg gagagcctaa
601 gcctgacaga cccaaggggc taaagagagc agcatctgcc atatacagtg gctacatctt
661 tgactatgat tactaccggg acgacttcta cgacaggctc ttcgactacc ggggccgtct
721 gtcgcccgtg ccagtgccca gggcggtccc tgtgaagcga ccccgggtca cagtcccttt
781 ggtccggcgt gtcaaaacta acgtacctgt caagctcttt gcccgctcca cagctgtcac
841 caccagctca gccaagatca agttaaagag cagtgagctg caggccatca agacggagct
901 gacacagatc aagtccaata tcgatgccct gctgagccgc ttggagcaga tcgctgcgga
961 gcaaaaggcc aatccagatg gcaagaagaa gggtgatgga ggtggcgcca gcggcggcgg
1021 cggcggtggt ggtggcagcg gtggcggtgg cagtggtggt ggcggtggcg gtggcagcag
1081 ccggccacca gccccccaag agaacacaac ttctgaggca ggcctgcccc agggggaagc
1141 acggacccga gacgacggcg atgaggaagg gctcctgaca cacagcgagg aagagctgga
1201 acacagccag gacacagacg cggatgatgg ggccttgcag taagcagcct gacaggagca
1261 atggccacca gcaggtgaag ggcatcgctg ccccaggcct caagccgggc acccaaccct
1321 ggatgccacc ccccagcggg taccagagga aagctggcag caggcgcctc ctcccccaac
1381 gcatcccagc cagtgccatg tcctctgcag gtggagttac tggcctactc cttccccatg
1441 agccctccct gtctgcactg cccaggccag agggtagagc acaggggttt ccccatacta
1501 cctcccctcc ccaggacact cccaggcttg ggttttttct ataggtttgg cggggggcca
1561 cagggagggg accctgacaa taaagagatt ggatcccaaa aaaaaaaaaa aaaa
//