LOCUS BC103751 1005 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens proteasome (prosome, macropain) subunit, alpha type,
5, mRNA (cDNA clone MGC:117302 IMAGE:6013212), complete cds.
ACCESSION BC103751
VERSION BC103751.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1005)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1005)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (07-SEP-2005) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 232 Row: a Column: 17
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 23110941.
FEATURES Location/Qualifiers
source 1..1005
/db_xref="H-InvDB:HIT000337343"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:117302 IMAGE:6013212"
/tissue_type="Testis, embryonal carcinoma"
/clone_lib="NIH_MGC_92"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1005
/gene="PSMA5"
/gene_synonym="PSC5"
/gene_synonym="ZETA"
/db_xref="GeneID:5686"
/db_xref="HGNC:HGNC:9534"
/db_xref="MIM:176844"
CDS 94..819
/gene="PSMA5"
/gene_synonym="PSC5"
/gene_synonym="ZETA"
/codon_start=1
/product="proteasome (prosome, macropain) subunit, alpha
type, 5"
/protein_id="AAI03752.1"
/db_xref="GeneID:5686"
/db_xref="HGNC:HGNC:9534"
/db_xref="MIM:176844"
/translation="MFLTRSEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGIQTSE
GVCLAVEKRITSPLMEPSSIEKIVEIDAHIGCAMSGLIADAKTLIDKARVETQNHWFT
YNETMTVESVTQAVSNLALQFGEEDADPGAMSRPFGVALLFGGVDEKGPQLFHMDPSG
TFVQCDARAIGSASEGAQSSLQEVYHKSMTLKEAIKSSLIILKQVMEEKLNATNIELA
TVQPGQNFHMFTKEELEEVIKDI"
BASE COUNT 291 a 205 c 242 g 267 t
ORIGIN
1 gtgggtgagt tggctgccgg tgagttgggt gccggtggag tcgtgttggt cctcagaatc
61 cccgcgtagc cgctgcctcc tcctaccctc gccatgtttc ttacccggtc tgagtacgac
121 aggggcgtga atactttttc tcccgaagga agattatttc aagtggaata tgccattgag
181 gctatcaagc ttggttctac agccattggg atccagacat cagagggtgt gtgcctagct
241 gtggagaaga gaattacttc cccactgatg gagcccagca gcattgagaa aattgtagag
301 attgatgctc acataggttg tgccatgagt gggctaattg ctgatgctaa gactttaatt
361 gataaagcca gagtggagac acagaaccac tggttcacct acaatgagac aatgacagtg
421 gagagtgtga cccaagctgt gtccaatctg gctttgcagt ttggagaaga agatgcagat
481 ccaggtgcca tgtctcgtcc ctttggagta gcattattat ttggaggagt tgatgagaaa
541 ggaccccagc tgtttcatat ggacccatct gggacctttg tacagtgtga tgctcgagca
601 attggctctg cttcagaggg tgcccagagc tccttgcaag aagtttacca caagtctatg
661 actttgaaag aagccatcaa gtcttcactc atcatcctca aacaagtaat ggaggagaag
721 ctgaatgcaa caaacattga gctagccaca gtgcagcctg gccagaattt ccacatgttc
781 acaaaggaag aacttgaaga ggttatcaag gacatttaag gaatcctgat cctcagaact
841 tctctgggac aatttcagtt ctaataatgt ccttaaattt tatttccagc tcctgttcct
901 tggaaaatct ccattgtatg tgcatttttt aaatgatgtc tgtacataaa ggcagttctg
961 aaataaagaa aattttaaaa aaaaaaaaaa aaaaaaaaaa aaaaa
//