LOCUS BC103742 2605 bp mRNA linear HUM 03-NOV-2005
DEFINITION Homo sapiens zinc finger protein 608, mRNA (cDNA clone
IMAGE:6177597), partial cds.
ACCESSION BC103742
VERSION BC103742.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2605)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2605)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (07-SEP-2005) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Dr. James R. Lupski
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 232 Row: h Column: 22
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 55741877.
FEATURES Location/Qualifiers
source 1..2605
/db_xref="H-InvDB:HIT000337334"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:6177597"
/tissue_type="Peripheral Nervous System, dorsal root
ganglion"
/clone_lib="Lupski_dorsal_root_ganglion"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..>2605
/gene="ZNF608"
/gene_synonym="NY-REN-36"
/db_xref="GeneID:57507"
/db_xref="HGNC:HGNC:29238"
/db_xref="IMGT/GENE-DB:29238"
/db_xref="MIM:29238"
CDS 459..>2605
/gene="ZNF608"
/gene_synonym="NY-REN-36"
/codon_start=1
/product="ZNF608 protein"
/protein_id="AAI03743.1"
/db_xref="GeneID:57507"
/db_xref="HGNC:HGNC:29238"
/db_xref="IMGT/GENE-DB:29238"
/db_xref="MIM:29238"
/translation="MSVNISTAGKGVDPNTVDTYDSGDDWEIGVGNLIIDLDADLEKD
RQKFEMNNSTTTTSSSNSKDCGGPASSGAGATAALADGLKFASVQASAPQGNSHKETS
KSKVKRSKTSKDANKSLPSAALYGIPEISSTGKRQEVQGRPGEATGMNSALGQSVSSG
GSGNPNSNSTSTSTSAATAGAGSCGKSKEEKPGKSQSSRGAKRDKDAGKSRKDKHDLL
QGHQNGSGSQAPSGGHLYGFGAKSNGGGASPFHCGGTGSGSVAAAGEVSKSAPDSGLM
GNSMLVKKEEEEEESHRRIKKLKTEKVDPLFTVPAPPPPISSSLTPQILPSYFSPSSS
NIAAPVEQLLVRTRSVGVNTCEVGVVTEPECLGPCEPGTSVNLEGIVWHETEEGVLVV
NVTWRNKTYVGTLLDCTKHDWAPPRFCESPTSDLEMRGGRGRGKRARSAAAAPGSEAS
FTESRGLQNKNRGGANGKGRRGSLNASGRRTPPNCAAEDIKASPSSTNKRKNKPPMEL
DLNSSSEDNKPGKRVRTNSRSTPTTPQGKPETTFLDQGCSSPVLIDCPHPNCNKKYKH
INGLRYHQAHAHLDPENKLEFEPDSEDKISDCEEGLSNVALECSEPSTSVSAYDQLKA
PASPGAGNPPGTPKGKRELMSNGPGSIIGAKAGKNSGKKKGLNNELNNLPVISNMTAA
LDSCSAADGSLAAEMPKLEAEGLIDKKNLGDKE"
BASE COUNT 747 a 597 c 722 g 539 t
ORIGIN
1 cactccccct gtgtgtgtgt tgtgtttcag tcctgattta gtgttgcaga acaagcttgt
61 tgtgtgtgtg caccaggggg atttttgttt tgcttttttt aaattttaat ttttgctttt
121 ataaaaaata cacaggacgg tctgtgacat ttgatggtcc atcttcttta ataataaatt
181 tgttgaagag attataattt ccaaaataaa gcggctgcaa ccaaacacat tcaatgcagt
241 tagaaggaaa aggtcaactc gatccaatac agaccgaaaa ggtggacctg gactgagggt
301 gtaaaatccc tggacacatt cgtggggcag gaaaaagaag aggaagatta gaagattttt
361 tttttctttg agagaaagcc cagcggagat aaacgaatgt cccctcatct ccaaagaaaa
421 gttcatcgga tttttattct agagagctca tcttcaggat gtcagtgaac atttctactg
481 caggaaaagg tgtggatcca aatacagttg atacttatga cagtggcgat gattgggaaa
541 tcggggttgg aaatttaata attgatttgg acgctgattt ggagaaggac agacagaaat
601 ttgagatgaa taattccacc accaccacta gtagcagcaa ctccaaggat tgtggaggtc
661 cggcctccag tggggctggt gctaccgcag ccttagctga tggcctaaaa tttgcttctg
721 ttcaggcctc tgctccccag gggaattcac acaaagagac cagcaaatca aaagtgaaaa
781 ggagtaaaac ttctaaggat gctaataaat ctctgccttc tgctgccttg tatgggattc
841 ccgagatcag cagcactggc aagaggcagg aagtccaagg gcgccctgga gaggcaactg
901 gcatgaattc agcgctgggt caaagtgtga gcagcggcgg cagcggcaac ccaaacagca
961 atagtaccag caccagcacc tctgccgcca ccgcgggggc aggctcctgt gggaaaagca
1021 aagaggagaa gccaggtaaa agccagagca gccgaggcgc caagcgggat aaggatgcgg
1081 ggaaatccag gaaggacaag cacgacctgc ttcagggcca ccagaatggc agtggcagcc
1141 aggccccttc cggggggcac ctctatggct ttggggccaa gagcaatgga ggtggcgcga
1201 gccccttcca ctgcgggggc actgggagtg gcagcgtcgc cgctgcaggg gaagttagca
1261 aaagtgcccc ggattcaggg ctcatgggaa actctatgtt ggtaaagaag gaagaggagg
1321 aggaggagag ccacaggcga atcaagaaac tgaaaactga gaaggttgac cccctgttta
1381 cagtgccagc gccaccaccg ccgatttcca gcagtctcac gcctcagatt ctaccctcct
1441 acttttcccc atcttcatcc aatattgcag caccggttga acagcttttg gttcggactc
1501 gttctgtggg tgtcaataca tgtgaagttg gagtagtgac agagccagag tgtcttgggc
1561 cctgtgaacc tgggaccagt gtgaatttgg aagggatcgt gtggcatgaa acagaagaag
1621 gtgtcctagt ggtcaatgtc acgtggagga acaaaacgta cgtgggaacc ctactggact
1681 gcaccaagca cgactgggcc cctcccaggt tttgtgagtc accgacaagt gacctggaga
1741 tgagaggggg ccggggcaga gggaagagag caaggtctgc tgctgctgcc ccgggctccg
1801 aggccagctt cacagagtcc agagggctgc agaataagaa cagagggggg gccaatggga
1861 aagggaggcg gggcagcctc aatgccagcg gacgaaggac acccccaaat tgtgctgctg
1921 aggatatcaa agccagccct tcctccacca acaaaaggaa aaacaagcct ccaatggagc
1981 tggacctgaa ctccagctct gaggacaata agcctggaaa gcgtgtccgc acaaattcca
2041 gaagcactcc cactacccct caagggaaac cagagactac ttttttggac caaggctgct
2101 cttctccagt gttaatcgac tgtccccacc caaactgcaa caaaaagtac aagcacatta
2161 acggcctgag gtaccaccag gctcatgcac acttagaccc agaaaacaag ctggagttcg
2221 agcctgacag tgaggacaag atctcggact gtgaggaagg attgagtaat gtggcacttg
2281 aatgcagtga gccaagcaca agtgtatctg cttatgacca gttgaaggca ccggcatccc
2341 ctggtgctgg aaacccacct gggaccccaa agggaaagag agagctgatg agcaatggcc
2401 caggttccat tattggtgct aaagctggga agaattctgg caaaaagaag ggccttaaca
2461 atgaactgaa caaccttcca gtaatctcca acatgacggc tgcgttagac agttgctcgg
2521 cagcagacgg cagtttggct gctgagatgc ctaaactgga agcagaagga ttaattgaca
2581 agaaaaattt aggagataaa gaaaa
//