LOCUS BC103495 2413 bp mRNA linear HUM 21-JAN-2006 DEFINITION Homo sapiens pentatricopeptide repeat domain 1, mRNA (cDNA clone MGC:119682 IMAGE:40011658), complete cds. ACCESSION BC103495 VERSION BC103495.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2413) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2413) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (21-AUG-2005) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Baylor Human Genome Sequencing Center cDNA Library Preparation: Baylor Human Genome Sequencing Center cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAM Plate: 4 Row: i Column: 1. FEATURES Location/Qualifiers source 1..2413 /db_xref="H-InvDB:HIT000337277" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:119682 IMAGE:40011658" /tissue_type="PCR rescued clones" /clone_lib="NIH_MGC_283" /note="Vector: pCR-Blunt II-TOPO with reversed insert; Clone identification sequence tag: AATACG" gene 1..2413 /gene="PTCD1" /gene_synonym="KIAA0632" /db_xref="GeneID:26024" /db_xref="HGNC:HGNC:22198" /db_xref="IMGT/GENE-DB:22198" /db_xref="MIM:22198" CDS 100..2202 /gene="PTCD1" /gene_synonym="KIAA0632" /codon_start=1 /product="pentatricopeptide repeat domain 1" /protein_id="AAI03496.1" /db_xref="GeneID:26024" /db_xref="HGNC:HGNC:22198" /db_xref="IMGT/GENE-DB:22198" /db_xref="MIM:22198" /translation="MDFVRLARLFARARPMGLFILQHLDPCRARWAGGREGLMRPMWA PFSSSSSQLPLGQERQENTGSLGSDPSHSNSTATQEEDEEEEESFGTLSDKYSSRRLF RKSAAQFHNLRFGEWRDEQMEPEPKLWRGRRNTPYWYFLQCKHLIKEGKLVEALDLFE RQMLKEERLQPMESNYTVLIGGCGRVGYLKKAFNLYNQMKKRDLEPSDATYTALFNVC AESPWKDSALQSALKLRQQLQAKNFELNLKTYHALLKMAAKCADLRMCLDVFKEIIHK GHVVTEETFSFLLMGCIQDKKTGFRYALQVWRLMLSLGLQPSRDSYNLLLVAARDCGL GDPQVASELLLKPREEATVLQPPVSRQRPRRTAQAKAGNLMSAMLHVEALERQLFLEP SQALGPPEPPEARVPGKAQPEVDTKAEPSHTAALTAVALKPPPVELEVNLLTPGAVPP TVVSFGTVTTPADRLALIGGLEGFLSKMAEHRQQPDIRTLTLLAEVVESGSPAESLLL ALLDEHQVEADLTFFNTLVRKKSKLGDLEGAKALLPVLAKRGLVPNLQTFCNLAIGCH RPKDGLQLLTDMKKSQVTPNTHIYSALINAAIRKLNYTYLISILKDMKQNRVPVNEVV IRQLEFAAQYPPTFDRYQGKNTYLEKIDGFRAYYKQWLTVMPAEETPHPWQKFRTKPQ GDQDTGKEADDGCALGGR" BASE COUNT 550 a 723 c 749 g 391 t ORIGIN 1 cgaggaagag actggttcgc cgcggggacc gggcagggct ccccgtcgga gtgcactgcg 61 ccggacactt caagccctgg agggacagga aagccagaaa tggacttcgt gagactcgct 121 cgactgttcg ccagggcccg ccccatggga ctgttcatcc tgcaacacct ggacccctgt 181 agagccaggt gggcaggagg cagggagggg ctgatgcggc caatgtgggc gcccttcagc 241 agctcctcct ctcagctgcc cctcggccag gagcgtcagg aaaacacggg cagcctgggc 301 tctgacccga gccactccaa ctccacggcc acgcaggaag aagacgagga ggaggaggag 361 agttttggga ccctctctga caaatactcc tcccggagac tattccgcaa atccgcagcc 421 cagttccata acctgcggtt tggggaatgg agagatgagc aaatggaacc ggagcccaaa 481 ttatggcgag gccggagaaa caccccgtac tggtacttct tgcagtgcaa acacctgatc 541 aaggaaggga agctggttga agccctggac ctgtttgaga ggcagatgct gaaggaggag 601 cgattgcagc ccatggagag caactacacg gtgctgattg ggggctgcgg gcgggttggc 661 tacctgaaga aggccttcaa cctctacaac cagatgaaaa agcgggacct ggagccctcg 721 gacgccacct acacggccct gttcaacgtc tgtgccgagt ccccctggaa ggactcagct 781 ctacagagcg ccctgaagct ccggcagcag ctgcaggcca aaaacttcga gctcaacttg 841 aaaacatacc acgcgctgct gaagatggct gccaagtgcg cagaccttag gatgtgcctc 901 gatgtgttca aggaaatcat ccacaaaggg cacgtggtca cagaggagac cttcagtttc 961 ctgctcatgg gctgcatcca agacaagaag acaggcttcc ggtacgccct ccaggtgtgg 1021 cggctgatgc tgagtctagg gctacagccg agccgggaca gctacaacct gctgttggtg 1081 gcagctcggg actgtggcct aggggacccc caggtggcct cagagctgct tctgaagccc 1141 agggaggagg cgactgtgct tcagccccca gtgagcaggc agcggccaag gaggacagcc 1201 caggccaagg caggcaacct catgtcagcc atgctgcatg tggaggccct ggagaggcag 1261 ctgtttctgg aaccttctca ggcacttggg cctccagagc ctccggaagc cagagtgccc 1321 ggcaaggccc aaccagaggt ggatactaag gcagagccca gccacacagc agccctcacc 1381 gcagtggccc tgaagccacc tcccgtggag ctggaagtca acctcctgac ccccggggcc 1441 gttcccccta cagtggtctc ctttggaacg gtgaccaccc cagctgaccg gctggccttg 1501 atagggggcc tggagggctt cctgagcaag atggcagagc acaggcagca gcccgacatc 1561 aggaccctca cgctactggc cgaggtggtg gagtccggga gtcctgcaga gtccttgctg 1621 ctggccctcc tggatgagca ccaggtagag gccgacctga cattctttaa cacgctggtg 1681 agaaagaaga gcaagctggg agacctggag ggggccaagg cgctgttgcc ggtcctggca 1741 aagaggggcc tcgtccccaa cctgcagaca ttctgcaacc tggccatcgg gtgccacagg 1801 ccgaaggacg gtctacagct tctcacagac atgaagaagt cccaggtgac ccccaacact 1861 cacatctaca gtgccctcat caacgcggcc atcaggaagc tgaactacac ctatctcatc 1921 agcatcttga aggacatgaa gcagaacagg gtcccggtga acgaagtggt catccgccag 1981 ctggagtttg cagcccagta ccctcccacc tttgaccggt accaagggaa gaacacctac 2041 ctggagaaga ttgatggctt ccgagcctat tacaagcagt ggctgacagt gatgcccgca 2101 gaggaaaccc cgcacccctg gcagaagttc cggaccaagc cccaggggga ccaggacacc 2161 ggcaaggagg ctgatgacgg atgtgccctt gggggcaggt gatgggagca cagctggaac 2221 aatgtgctcg gcccccagtg ctctgtggga gccccaggac aagtgagctg gtgtcacctc 2281 ctgcctgggg gaagagccag gccctgagga acagccgcag cgtgtcacag gtgttggtga 2341 ggacacacac taggcccaag gtgcctgtgc tcccagcagg tccaagtgca gctccagcca 2401 cctttgcgtg tca //