LOCUS       BC103495                2413 bp    mRNA    linear   HUM 21-JAN-2006
DEFINITION  Homo sapiens pentatricopeptide repeat domain 1, mRNA (cDNA clone
            MGC:119682 IMAGE:40011658), complete cds.
ACCESSION   BC103495
VERSION     BC103495.1
KEYWORDS    MGC.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 2413)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   2  (bases 1 to 2413)
  CONSRTM   NIH MGC Project
  TITLE     Direct Submission
  JOURNAL   Submitted (21-AUG-2005) National Institutes of Health, Mammalian
            Gene Collection (MGC), Bethesda, MD 20892-2590, USA
  REMARK    NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT     Contact: MGC help desk
            Email: cgapbs-r@mail.nih.gov
            Tissue Procurement: Baylor Human Genome Sequencing Center
            cDNA Library Preparation: Baylor Human Genome Sequencing Center
            cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
            DNA Sequencing by: National Institutes of Health Intramural
            Sequencing Center (NISC),
            Gaithersburg, Maryland;
            Web site: http://www.nisc.nih.gov/
            Contact: nisc_mgc@nhgri.nih.gov
            Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
            Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
            Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
            Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
            Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
            McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
            Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
            Young,A., Zhang,L.-H. and Green,E.D.
            
            Clone distribution: MGC clone distribution information can be found
            through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
            Series: IRAM Plate: 4 Row: i Column: 1.
FEATURES             Location/Qualifiers
     source          1..2413
                     /db_xref="H-InvDB:HIT000337277"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /clone="MGC:119682 IMAGE:40011658"
                     /tissue_type="PCR rescued clones"
                     /clone_lib="NIH_MGC_283"
                     /note="Vector: pCR-Blunt II-TOPO with reversed insert;
                     Clone identification sequence tag: AATACG"
     gene            1..2413
                     /gene="PTCD1"
                     /gene_synonym="KIAA0632"
                     /db_xref="GeneID:26024"
                     /db_xref="HGNC:HGNC:22198"
                     /db_xref="IMGT/GENE-DB:22198"
                     /db_xref="MIM:22198"
     CDS             100..2202
                     /gene="PTCD1"
                     /gene_synonym="KIAA0632"
                     /codon_start=1
                     /product="pentatricopeptide repeat domain 1"
                     /protein_id="AAI03496.1"
                     /db_xref="GeneID:26024"
                     /db_xref="HGNC:HGNC:22198"
                     /db_xref="IMGT/GENE-DB:22198"
                     /db_xref="MIM:22198"
                     /translation="MDFVRLARLFARARPMGLFILQHLDPCRARWAGGREGLMRPMWA
                     PFSSSSSQLPLGQERQENTGSLGSDPSHSNSTATQEEDEEEEESFGTLSDKYSSRRLF
                     RKSAAQFHNLRFGEWRDEQMEPEPKLWRGRRNTPYWYFLQCKHLIKEGKLVEALDLFE
                     RQMLKEERLQPMESNYTVLIGGCGRVGYLKKAFNLYNQMKKRDLEPSDATYTALFNVC
                     AESPWKDSALQSALKLRQQLQAKNFELNLKTYHALLKMAAKCADLRMCLDVFKEIIHK
                     GHVVTEETFSFLLMGCIQDKKTGFRYALQVWRLMLSLGLQPSRDSYNLLLVAARDCGL
                     GDPQVASELLLKPREEATVLQPPVSRQRPRRTAQAKAGNLMSAMLHVEALERQLFLEP
                     SQALGPPEPPEARVPGKAQPEVDTKAEPSHTAALTAVALKPPPVELEVNLLTPGAVPP
                     TVVSFGTVTTPADRLALIGGLEGFLSKMAEHRQQPDIRTLTLLAEVVESGSPAESLLL
                     ALLDEHQVEADLTFFNTLVRKKSKLGDLEGAKALLPVLAKRGLVPNLQTFCNLAIGCH
                     RPKDGLQLLTDMKKSQVTPNTHIYSALINAAIRKLNYTYLISILKDMKQNRVPVNEVV
                     IRQLEFAAQYPPTFDRYQGKNTYLEKIDGFRAYYKQWLTVMPAEETPHPWQKFRTKPQ
                     GDQDTGKEADDGCALGGR"
BASE COUNT          550 a          723 c          749 g          391 t
ORIGIN      
        1 cgaggaagag actggttcgc cgcggggacc gggcagggct ccccgtcgga gtgcactgcg
       61 ccggacactt caagccctgg agggacagga aagccagaaa tggacttcgt gagactcgct
      121 cgactgttcg ccagggcccg ccccatggga ctgttcatcc tgcaacacct ggacccctgt
      181 agagccaggt gggcaggagg cagggagggg ctgatgcggc caatgtgggc gcccttcagc
      241 agctcctcct ctcagctgcc cctcggccag gagcgtcagg aaaacacggg cagcctgggc
      301 tctgacccga gccactccaa ctccacggcc acgcaggaag aagacgagga ggaggaggag
      361 agttttggga ccctctctga caaatactcc tcccggagac tattccgcaa atccgcagcc
      421 cagttccata acctgcggtt tggggaatgg agagatgagc aaatggaacc ggagcccaaa
      481 ttatggcgag gccggagaaa caccccgtac tggtacttct tgcagtgcaa acacctgatc
      541 aaggaaggga agctggttga agccctggac ctgtttgaga ggcagatgct gaaggaggag
      601 cgattgcagc ccatggagag caactacacg gtgctgattg ggggctgcgg gcgggttggc
      661 tacctgaaga aggccttcaa cctctacaac cagatgaaaa agcgggacct ggagccctcg
      721 gacgccacct acacggccct gttcaacgtc tgtgccgagt ccccctggaa ggactcagct
      781 ctacagagcg ccctgaagct ccggcagcag ctgcaggcca aaaacttcga gctcaacttg
      841 aaaacatacc acgcgctgct gaagatggct gccaagtgcg cagaccttag gatgtgcctc
      901 gatgtgttca aggaaatcat ccacaaaggg cacgtggtca cagaggagac cttcagtttc
      961 ctgctcatgg gctgcatcca agacaagaag acaggcttcc ggtacgccct ccaggtgtgg
     1021 cggctgatgc tgagtctagg gctacagccg agccgggaca gctacaacct gctgttggtg
     1081 gcagctcggg actgtggcct aggggacccc caggtggcct cagagctgct tctgaagccc
     1141 agggaggagg cgactgtgct tcagccccca gtgagcaggc agcggccaag gaggacagcc
     1201 caggccaagg caggcaacct catgtcagcc atgctgcatg tggaggccct ggagaggcag
     1261 ctgtttctgg aaccttctca ggcacttggg cctccagagc ctccggaagc cagagtgccc
     1321 ggcaaggccc aaccagaggt ggatactaag gcagagccca gccacacagc agccctcacc
     1381 gcagtggccc tgaagccacc tcccgtggag ctggaagtca acctcctgac ccccggggcc
     1441 gttcccccta cagtggtctc ctttggaacg gtgaccaccc cagctgaccg gctggccttg
     1501 atagggggcc tggagggctt cctgagcaag atggcagagc acaggcagca gcccgacatc
     1561 aggaccctca cgctactggc cgaggtggtg gagtccggga gtcctgcaga gtccttgctg
     1621 ctggccctcc tggatgagca ccaggtagag gccgacctga cattctttaa cacgctggtg
     1681 agaaagaaga gcaagctggg agacctggag ggggccaagg cgctgttgcc ggtcctggca
     1741 aagaggggcc tcgtccccaa cctgcagaca ttctgcaacc tggccatcgg gtgccacagg
     1801 ccgaaggacg gtctacagct tctcacagac atgaagaagt cccaggtgac ccccaacact
     1861 cacatctaca gtgccctcat caacgcggcc atcaggaagc tgaactacac ctatctcatc
     1921 agcatcttga aggacatgaa gcagaacagg gtcccggtga acgaagtggt catccgccag
     1981 ctggagtttg cagcccagta ccctcccacc tttgaccggt accaagggaa gaacacctac
     2041 ctggagaaga ttgatggctt ccgagcctat tacaagcagt ggctgacagt gatgcccgca
     2101 gaggaaaccc cgcacccctg gcagaagttc cggaccaagc cccaggggga ccaggacacc
     2161 ggcaaggagg ctgatgacgg atgtgccctt gggggcaggt gatgggagca cagctggaac
     2221 aatgtgctcg gcccccagtg ctctgtggga gccccaggac aagtgagctg gtgtcacctc
     2281 ctgcctgggg gaagagccag gccctgagga acagccgcag cgtgtcacag gtgttggtga
     2341 ggacacacac taggcccaag gtgcctgtgc tcccagcagg tccaagtgca gctccagcca
     2401 cctttgcgtg tca
//