LOCUS BC102018 881 bp mRNA linear HUM 21-JUL-2006
DEFINITION Homo sapiens proteasome (prosome, macropain) subunit, alpha type,
5, mRNA (cDNA clone MGC:125802 IMAGE:40030391), complete cds.
ACCESSION BC102018
VERSION BC102018.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 881)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 881)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (12-AUG-2005) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Baylor Human Genome Sequencing Center
cDNA Library Preparation: Baylor Human Genome Sequencing Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAM Plate: 12 Row: d Column: 12.
FEATURES Location/Qualifiers
source 1..881
/db_xref="H-InvDB:HIT000337249"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:125802 IMAGE:40030391"
/tissue_type="PCR rescued clones"
/clone_lib="NIH_MGC_283"
/note="Vector: pCR-Blunt II-TOPO with reversed insert;
Clone identification sequence tag: TGGGAGTC"
gene 1..881
/gene="PSMA5"
/gene_synonym="PSC5"
/gene_synonym="ZETA"
/db_xref="GeneID:5686"
/db_xref="HGNC:HGNC:9534"
/db_xref="MIM:176844"
CDS 71..796
/gene="PSMA5"
/gene_synonym="PSC5"
/gene_synonym="ZETA"
/codon_start=1
/product="proteasome (prosome, macropain) subunit, alpha
type, 5"
/protein_id="AAI02019.1"
/db_xref="GeneID:5686"
/db_xref="HGNC:HGNC:9534"
/db_xref="MIM:176844"
/translation="MFLTRSEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGIQTSE
GVCLAVEKRITSPLMEPSSIEKIVEIDAHIGCAMSGLIADAKTLIDKARVETQNHWFT
YNETMTVESVTQAVSNLALQFGEEDADPGAMSRPFGVALLFGGVDEKGPQLFHMDPSG
TFVQCDARAIGSASEGAQSSLQEVYHKSMTLKEAIKSSLIILKQVMEEKLNATNIELA
TVQPGQNFHMFTKEELEEVIKDI"
BASE COUNT 234 a 195 c 219 g 233 t
ORIGIN
1 gttgggtgcc ggtggagtcg tgttggtcct cagaatcccc gcgtagccgc tgcctcctcc
61 taccctcgcc atgtttctta cccggtctga gtacgacagg ggcgtgaata ctttttctcc
121 cgaaggaaga ttatttcaag tggaatatgc cattgaggct atcaagcttg gttctacagc
181 cattgggatc cagacatcag agggtgtgtg cctagctgtg gagaagagaa ttacttcccc
241 actgatggag cccagcagca ttgagaaaat tgtagagatt gatgctcaca taggttgtgc
301 catgagtggg ctaattgctg atgctaagac cttaattgat aaagccagag tggagacaca
361 gaaccactgg ttcacctaca atgagacaat gacagtggag agtgtgaccc aagctgtgtc
421 caatctggct ttgcagtttg gagaagaaga tgcagatcca ggtgccatgt ctcgtccctt
481 tggagtagca ttattatttg gaggagttga tgagaaagga ccccagctgt ttcatatgga
541 cccatctggg acctttgtac agtgtgatgc tcgagcaatt ggctctgctt cagagggtgc
601 ccagagctcc ttgcaagaag tttaccacaa gtctatgact ttgaaagaag ccatcaagtc
661 ttcactcatc atcctcaaac aagtaatgga ggagaagctg aatgcaacaa acattgagct
721 agccacagtg cagcctggcc agaatttcca catgttcaca aaggaagaac ttgaagaggt
781 tatcaaggac atttaaggaa tcctgatcct cagaacttct ctgggacaat ttcagttcta
841 ataatgtcct taaattttat ttccagctcc tgttccttgg a
//