LOCUS BC102017 857 bp mRNA linear HUM 21-JUL-2006
DEFINITION Homo sapiens C-type lectin domain family 4, member C, mRNA (cDNA
clone MGC:125793 IMAGE:40030339), complete cds.
ACCESSION BC102017
VERSION BC102017.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 857)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 857)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (12-AUG-2005) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Baylor Human Genome Sequencing Center
cDNA Library Preparation: Baylor Human Genome Sequencing Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAM Plate: 12 Row: d Column: 10.
FEATURES Location/Qualifiers
source 1..857
/db_xref="H-InvDB:HIT000337248"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:125793 IMAGE:40030339"
/tissue_type="PCR rescued clones"
/clone_lib="NIH_MGC_283"
/note="Vector: pCR-Blunt II-TOPO with reversed insert;
Clone identification sequence tag: GTTAAACG"
gene 1..857
/gene="CLEC4C"
/gene_synonym="BDCA2"
/gene_synonym="CD303"
/gene_synonym="DLEC"
/gene_synonym="HECL"
/gene_synonym="PRO34150"
/db_xref="GeneID:170482"
/db_xref="HGNC:HGNC:13258"
/db_xref="MIM:606677"
CDS 101..742
/gene="CLEC4C"
/gene_synonym="BDCA2"
/gene_synonym="CD303"
/gene_synonym="DLEC"
/gene_synonym="HECL"
/gene_synonym="PRO34150"
/codon_start=1
/product="C-type lectin domain family 4, member C"
/protein_id="AAI02018.1"
/db_xref="GeneID:170482"
/db_xref="HGNC:HGNC:13258"
/db_xref="MIM:606677"
/translation="MVPEEEPQDREKGLWWFQLKVWSMAVVSILLLSVCFTVSSVVPH
NFMYSKTVKRLSKLREYQQYHPSLTCVMEGKDIEDWSCCPTPWTSFQSSCYFISTGMQ
SWTKSQKNCSVMGADLVVINTREEQDFIIQNLKRNSSYFLGLSDPGGRRHWQWVDQTP
YNENVTFWHSGEPNNLDERCAIINFRSSEEWGWNDIHCHVPQKSICKMKKIYI"
BASE COUNT 249 a 171 c 204 g 233 t
ORIGIN
1 tgaaagaacc acaccccgaa agtaacatct ttggagaaag tgatacaaga gcttctgcac
61 ccacctgata gaggaagtcc aaagggtgtg cgcacacaca atggtgcctg aagaagagcc
121 tcaagaccga gagaaaggac tctggtggtt ccagttgaag gtctggtcca tggcagtcgt
181 atccatcttg ctcctcagtg tctgtttcac tgtgagttct gtggtgcctc acaattttat
241 gtatagcaaa actgtcaaga ggctgtccaa gttacgagag tatcaacagt atcatccaag
301 cctgacctgc gtcatggaag gaaaggacat agaagattgg agctgctgcc caaccccttg
361 gacttcattt cagtctagtt gctactttat ttctactggg atgcaatctt ggactaagag
421 tcaaaagaac tgttctgtga tgggggctga tctggtggtg atcaacacca gggaagaaca
481 ggatttcatc attcagaatc tgaaaagaaa ttcttcttat tttctggggc tgtcagatcc
541 agggggtcgg cgacattggc aatgggttga ccagacacca tacaatgaaa atgtcacatt
601 ctggcactca ggtgaaccca ataaccttga tgagcgttgt gcgataataa atttccgttc
661 ttcagaagaa tggggctgga atgacattca ctgtcatgta cctcagaagt caatttgcaa
721 gatgaagaag atctacatat aaatgaaata ttctccctgg aaatgtgttt gggttggcat
781 ccaccgttgt agaaagctaa attgattttt taatttatgt gtaagttttg tacaaggaat
841 gcccctaaaa tgtttca
//