LOCUS BC102016 858 bp mRNA linear HUM 17-JUL-2006 DEFINITION Homo sapiens C-type lectin domain family 4, member C, mRNA (cDNA clone MGC:125792 IMAGE:40030338), complete cds. ACCESSION BC102016 VERSION BC102016.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 858) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 858) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (12-AUG-2005) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Baylor Human Genome Sequencing Center cDNA Library Preparation: Baylor Human Genome Sequencing Center cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAM Plate: 12 Row: d Column: 8. FEATURES Location/Qualifiers source 1..858 /db_xref="H-InvDB:HIT000337247" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:125792 IMAGE:40030338" /tissue_type="PCR rescued clones" /clone_lib="NIH_MGC_282" /note="Vector: pCR-Blunt II-TOPO; Clone identification sequence tag: GGAAGGCG" gene 1..858 /gene="CLEC4C" /gene_synonym="BDCA2" /gene_synonym="CD303" /gene_synonym="DLEC" /gene_synonym="HECL" /gene_synonym="PRO34150" /db_xref="GeneID:170482" /db_xref="HGNC:HGNC:13258" /db_xref="MIM:606677" CDS 102..743 /gene="CLEC4C" /gene_synonym="BDCA2" /gene_synonym="CD303" /gene_synonym="DLEC" /gene_synonym="HECL" /gene_synonym="PRO34150" /codon_start=1 /product="C-type lectin domain family 4, member C" /protein_id="AAI02017.1" /db_xref="GeneID:170482" /db_xref="HGNC:HGNC:13258" /db_xref="MIM:606677" /translation="MVPEEEPQDREKGLWWFQLKVWSMAVVSILLLSVCFTVSSVVPH NFMYSKTVKRLSKLREYQQYHPSLTCVMEGKDIEDWSCCPTPWTSFQSSCYFISTGMQ SWTKSQKNCSVMGADLVVINTREEQDFIIQNLKRNSSYFLGLSDPGGRRHWQWVDQTP YNENVTFWHSGEPNNLDERCAIINFRSSEEWGWNDIHCHVPQKSICKMKKIYI" BASE COUNT 249 a 171 c 204 g 234 t ORIGIN 1 ttgaaagaac cacaccccga aagtaacatc tttggagaaa gtgatacaag agcttctgca 61 cccacctgat agaggaagtc caaagggtgt gcgcacacac aatggtgcct gaagaagagc 121 ctcaagaccg agagaaagga ctctggtggt tccagttgaa ggtctggtcc atggcagtcg 181 tatccatctt gctcctcagt gtctgtttca ctgtgagttc tgtggtgcct cacaatttta 241 tgtatagcaa aactgtcaag aggctgtcca agttacgaga gtatcaacag tatcatccaa 301 gcctgacctg cgtcatggaa ggaaaggaca tagaagattg gagctgctgc ccaacccctt 361 ggacttcatt tcagtctagt tgctacttta tttctactgg gatgcaatct tggactaaga 421 gtcaaaagaa ctgttctgtg atgggggctg atctggtggt gatcaacacc agggaagaac 481 aggatttcat cattcagaat ctgaaaagaa attcttctta ttttctgggg ctgtcagatc 541 cagggggtcg gcgacattgg caatgggttg accagacacc atacaatgaa aatgtcacat 601 tctggcactc aggtgaaccc aataaccttg atgagcgttg tgcgataata aatttccgtt 661 cttcagaaga atggggctgg aatgacattc actgtcatgt acctcagaag tcaatttgca 721 agatgaagaa gatctacata taaatgaaat attctccctg gaaatgtgtt tgggttggca 781 tccaccgttg tagaaagcta aattgatttt ttaatttatg tgtaagtttt gtacaaggaa 841 tgcccctaaa atgtttca //