LOCUS BC101972 687 bp mRNA linear HUM 03-NOV-2005 DEFINITION Homo sapiens apolipoprotein B mRNA editing enzyme, catalytic polypeptide 1, mRNA (cDNA clone IMAGE:40003128), partial cds. ACCESSION BC101972 VERSION BC101972.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 687) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 687) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (12-AUG-2005) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Baylor Human Genome Sequencing Center cDNA Library Preparation: Baylor Human Genome Sequencing Center cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAM Plate: 12 Row: e Column: 1. FEATURES Location/Qualifiers source 1..687 /db_xref="H-InvDB:HIT000337203" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:40003128" /tissue_type="PCR rescued clones" /clone_lib="NIH_MGC_282" /note="Vector: pCR-Blunt II-TOPO; Clone identification sequence tag: GGTTGGGC" gene 1..>687 /gene="APOBEC1" /gene_synonym="apobec-1" /gene_synonym="BEDP" /gene_synonym="CDAR1" /db_xref="GeneID:339" /db_xref="HGNC:HGNC:604" /db_xref="IMGT/GENE-DB:604" /db_xref="MIM:600130" CDS 19..>687 /gene="APOBEC1" /gene_synonym="apobec-1" /gene_synonym="BEDP" /gene_synonym="CDAR1" /codon_start=1 /product="APOBEC1 protein" /protein_id="AAI01973.1" /db_xref="GeneID:339" /db_xref="HGNC:HGNC:604" /db_xref="IMGT/GENE-DB:604" /db_xref="MIM:600130" /translation="MTSEKGPSTGDPTLRRRIEPWEFDVFYDPRELRKEACLLYEIKW GMSRKIWRSSGKNTTNHVEVNFIKKFTSERDFHPSISCSITWFLSWSPCWECSQAIRE FLSRHPGVTLVIYVARLFWHMDQQNRQGLRDLVNSGVTIQIMRASEYYHCWRNFVNYP PGDEAHWPQYPPLWMMLYALELHCIILSLPPCLKISRRWQNHLTFFRLHLQNCHYQTI PPHIL" BASE COUNT 191 a 170 c 150 g 176 t ORIGIN 1 gtccagagac agagcaccat gacttctgag aaaggtcctt caaccggtga ccccactctg 61 aggagaagaa tcgaaccctg ggagtttgac gtcttctatg accccagaga acttcgtaaa 121 gaggcctgtc tgctctacga aatcaagtgg ggcatgagcc ggaagatctg gcgaagctca 181 ggcaaaaaca ccaccaatca cgtggaagtt aattttataa aaaaatttac gtcagaaaga 241 gattttcacc catccatcag ctgctccatc acctggttct tgtcctggag tccctgctgg 301 gaatgctccc aggctattag agagtttctg agtcggcacc ctggtgtgac tctagtgatc 361 tacgtagctc ggcttttttg gcacatggat caacaaaatc ggcaaggtct cagggacctt 421 gttaacagtg gagtaactat tcagattatg agagcatcag agtattatca ctgctggagg 481 aattttgtca actacccacc tggggatgaa gctcactggc cacaataccc acctctgtgg 541 atgatgttgt acgcactgga gctgcactgc ataattctaa gtcttccacc ctgtttaaag 601 atttcaagaa gatggcaaaa tcatcttaca tttttcagac ttcatcttca aaactgccat 661 taccaaacga ttccgccaca catcctt //