LOCUS BC101845 668 bp mRNA linear HUM 03-NOV-2005
DEFINITION Homo sapiens peptidoglycan recognition protein 1, mRNA (cDNA clone
MGC:126894 IMAGE:8069351), complete cds.
ACCESSION BC101845
VERSION BC101845.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 668)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 668)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (12-AUG-2005) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Mike Brownstein, NIMH
cDNA Library Preparation: British Columbia Cancer Research Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRCB Plate: 2 Row: P Column: 21.
FEATURES Location/Qualifiers
source 1..668
/db_xref="H-InvDB:HIT000337189"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:126894 IMAGE:8069351"
/tissue_type="Lung and placenta, PCR rescued clones"
/clone_lib="NIH_MGC_326"
/note="Vector: pCR4-TOPO; Clone identification sequence
tag: GGCCGCCC"
gene 1..668
/gene="PGLYRP1"
/gene_synonym="PGRP"
/gene_synonym="PGRP-S"
/gene_synonym="PGRPS"
/gene_synonym="TAG7"
/db_xref="GeneID:8993"
/db_xref="HGNC:HGNC:8904"
/db_xref="IMGT/GENE-DB:8904"
/db_xref="MIM:604963"
CDS 40..630
/gene="PGLYRP1"
/gene_synonym="PGRP"
/gene_synonym="PGRP-S"
/gene_synonym="PGRPS"
/gene_synonym="TAG7"
/codon_start=1
/product="peptidoglycan recognition protein 1"
/protein_id="AAI01846.1"
/db_xref="GeneID:8993"
/db_xref="HGNC:HGNC:8904"
/db_xref="IMGT/GENE-DB:8904"
/db_xref="MIM:604963"
/translation="MSRRSMLLAWALPSLLRLGAAQETEDPACCSPIVPRNEWKALAS
ECAQHLSLPLRYVVVSHTAGSSCNTPASCQQQARNVQHYHMKTLGWCDVGYNFLIGED
GLVYEGRGWNFTGAHSGHLWNPMSIGISFMGNYMDRVPTPQAIRAAQGLLACGVAQGA
LRSNYVLKGHRDVQRTLSPGNQLYHLIQNWPHYRSP"
BASE COUNT 124 a 241 c 183 g 120 t
ORIGIN
1 cgctcctagc ggtctcccgg accctgccgc cctgccacta tgtcccgccg ctctatgctg
61 cttgcctggg ctctccccag cctccttcga ctcggagcgg ctcaggagac agaagacccg
121 gcctgctgca gccccatagt gccccggaac gagtggaagg ccctggcatc agagtgcgcc
181 cagcacctga gcctgccctt acgctatgtg gtggtatcgc acacggcggg cagcagctgc
241 aacacccccg cctcgtgcca gcagcaggcc cggaatgtgc agcactacca catgaagaca
301 ctgggctggt gcgacgtggg ctacaacttc ctgattggag aagacgggct cgtatacgag
361 ggccgtggct ggaacttcac gggtgcccac tcaggtcact tatggaaccc catgtccatt
421 ggcatcagct tcatgggcaa ctacatggat cgggtgccca caccccaggc catccgggca
481 gcccagggtc tactggcctg cggtgtggct cagggagccc tgaggtccaa ctatgtgctc
541 aaaggacacc gggatgtgca gcgtacactc tctccaggca accagctcta ccacctcatc
601 cagaattggc cacactaccg ctccccctga ggccctgctg atccgcaccc cattcctccc
661 ctcccatg
//