LOCUS BC101774 3675 bp mRNA linear HUM 18-MAR-2009
DEFINITION Homo sapiens STON1-GTF2A1L readthrough transcript, mRNA (cDNA clone
MGC:126823 IMAGE:8069280), complete cds.
ACCESSION BC101774
VERSION BC101774.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3675)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3675)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (12-AUG-2005) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Mike Brownstein, NIMH
cDNA Library Preparation: British Columbia Cancer Research Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRCB Plate: 2 Row: M Column: 22.
FEATURES Location/Qualifiers
source 1..3675
/db_xref="H-InvDB:HIT000337122"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:126823 IMAGE:8069280"
/tissue_type="Brain, cerebellum, PCR rescued clones"
/clone_lib="NIH_MGC_311"
/note="Vector: pCR4-TOPO with reversed insert; Clone
identification sequence tag: TGAGCCGT"
gene 1..3675
/gene="STON1-GTF2A1L"
/gene_synonym="SALF"
/db_xref="GeneID:286749"
/db_xref="HGNC:HGNC:30651"
CDS 28..3576
/gene="STON1-GTF2A1L"
/gene_synonym="SALF"
/codon_start=1
/product="STON1-GTF2A1L readthrough transcript"
/protein_id="AAI01775.1"
/db_xref="GeneID:286749"
/db_xref="HGNC:HGNC:30651"
/translation="MCSTNPGKWVTFDDDPAVQSSQKSKNFPLENQGVCRPNGLKLNL
PGLREFPSGSSSTSSTPLSSPIVDFYFSPGPPSNSPLSTPTKDFPGFPGIPKAGTHVL
YPIPESSSDSPLAISGGESSLLPTRPTCLSHALLPSDHSCTHPTPKVGLPDEVNPQQA
ESLGFQSDDLPQFQYFREDCAFSSPFWKDEGSDSHFTLDPPGSKKMFSSRNKEMPIDQ
KSLNKCSLNYICEKLEHLQSAENQDSLRSLSMHCLCAEENASSFVPHTLFRSQPKSGW
SFMLRIPEKKNMMSSRQWGPIFLKVLPGGILQMYYEQGLEKPFKEIQLDPYCRLSEPK
VENFSVAGKIHTVKIEHVSYTEKRKYHSKTEVVHEPDIEQMLKLGSTSYHDFLDFLTT
VEEELMKLPAVSKPKKNYEEQEISLEIVDNFWGKVTKEGKFVESAVITQIYCLCFVNG
NLECFLTLNDLELPKRDESYYEKDSEKKGIDILDYHFHKCVNVQEFEQSRIIKFVPLD
ACRFELMRFKTLYNGDNLPFSLKSVVVVQGAYVELQAFVNMASLAQRSSYAGSLRSCD
NIRIHFPVPSQWIKALWTMNLQRQKSLKAKMNRRACLGSLHELESEPVIQVTVGSAKY
ESAYQAVVWKIDRLPDKNSSLDHPHCLSYKLELGSDQEIPSDWYPFATVQFSVPDTCA
SRTEVRSLGVESDVQPQKHVQQRACYNIQPKLYRSVIEDVIEGVRNLFAEEGIEEQVL
KDLKQLWETKVLQSKATEDFFRNSIQSPLFTLQLPHSLHQTLQSSTASLVIPAGRTLP
SFTTAELGTSNSSANFTFPGYPIHVPAGVTLQTVSGHLYKVNVPIMVTETSGRAGILQ
HPIQQVFQQLGQPSVIQTSVPQLNPWSLQATTEKSQRIETVLQQPAILPSGPVDRKHL
ENATSDILVSPGNEHKIVPEALLCHQESSHYISLPGVVFSPQVSQTNSNVESVLSGSA
SMAQNLHDESLSTSPHGALHQHVTDIQLHILKNRMYGCDSVKQPRNIEEPSNIPVSEK
DSNSQVDLSIRVTDDDIGEIIQVDGSGDTSSNEEIGSTRDADENEFLGNIDGGDLKVP
EEEADSISNEDSATNSSDNEDPQVNIVEEDPLNSGDDVSEQDVPDLFDTDNVIVCQYD
KIHRSKNKWKFYLKDGVMCFGGRDYVFAKAIGDAEW"
BASE COUNT 1106 a 774 c 782 g 1013 t
ORIGIN
1 tgacaagacc acaatctgat cccaaagatg tgctccacaa atccaggcaa atgggtcacc
61 tttgatgatg atcctgctgt tcaatcttct caaaagtcaa agaattttcc tctggagaat
121 caaggtgtct gtagaccaaa tggactgaag ctgaaccttc ctggcctcag ggaatttccc
181 agtggatctt cctccaccag cagcactcct ctctcctccc ccattgtaga tttttatttc
241 agtccaggac ctccaagtaa ctctcctctt tctacaccta ccaaagactt cccaggtttt
301 cctggcatcc ccaaagcagg gactcatgtg ctttatccta ttccagaatc atcttcagac
361 agcccactcg caatatcagg aggagaatct tccttactgc ctaccagacc aacatgttta
421 tcccatgcct tgttacccag tgaccactca tgtacacatc caactcccaa agtaggtctt
481 ccagatgaag ttaatcctca acaggctgaa agcctaggat tccaaagtga tgatctcccc
541 cagtttcagt attttcgaga ggactgtgct ttttcaagtc cattttggaa agatgaaggc
601 agtgattccc atttcaccct tgacccacca ggaagcaaaa agatgttctc atcaagaaac
661 aaggagatgc ctattgacca aaaaagccta aataagtgtt cactcaacta tatctgtgag
721 aagcttgaac atctccagtc agctgagaac caagactcac ttagaagttt gtctatgcac
781 tgtctatgtg ctgaagaaaa tgcctcttcc tttgtccccc acacactctt caggagtcag
841 ccaaaatctg gatggtcttt catgctgaga attcctgaga agaagaatat gatgtcttcc
901 cggcaatggg gaccaatttt tctgaaagtt ttgcctggag gaattttgca gatgtattat
961 gaacagggat tagaaaaacc atttaaagag atacagcttg atccatattg taggctttct
1021 gaacccaagg ttgagaactt cagtgtagca ggaaaaatcc acactgtgaa gattgaacat
1081 gtgtcttaca cagaaaaaag gaaataccat tctaagacag aagtagttca tgaacctgac
1141 atagagcaga tgctgaagtt ggggtccaca tcgtaccatg acttccttga ctttctgact
1201 actgtggagg aggagctgat gaagttgcca gctgtttcaa aaccaaaaaa gaactacgag
1261 gagcaagaaa tttccttgga aattgtggac aacttttggg gtaaagtcac aaaagaagga
1321 aaatttgttg aaagtgctgt gataactcaa atttattgcc tctgctttgt gaatgggaac
1381 ctggaatgct ttttaacctt gaatgacctt gagttgccga agcgagatga atcctattat
1441 gagaaggact cagaaaaaaa ggggattgat attcttgact accattttca taagtgtgtg
1501 aatgtacaag aatttgagca atcaagaatc attaagtttg tacctctgga tgcctgccgg
1561 tttgagctga tgcgtttcaa gactttgtat aatggggata atcttccctt ttccttgaag
1621 tctgtagtgg ttgtccaggg agcatacgtg gaacttcagg cttttgtcaa catggcctca
1681 ttggcgcaga ggtcatccta tgctggttcc ttaaggtcct gtgacaatat aaggatacac
1741 tttcctgtcc catcgcagtg gatcaaggcc ctttggacca tgaacctcca gaggcagaag
1801 tctctgaaag ctaaaatgaa ccgccgagca tgtctgggga gtttacatga acttgaatct
1861 gaacctgtca ttcaagtcac tgtggggtca gcaaaatatg agagtgccta ccaggcagtg
1921 gtatggaaga tagatcggct tccagacaaa aattcaagtc tagatcatcc ccattgtctg
1981 tcatacaaat tagagcttgg atcagaccaa gaaattccct ctgattggta tccatttgct
2041 actgttcagt tttccgtgcc tgacacctgt gcctcaagga cagaggtcag gtctctggga
2101 gtggagagtg atgtccagcc acagaaacat gttcagcagc gagcttgcta caacatccag
2161 cctaaactct acagatctgt aattgaagat gtaattgaag gagttcggaa tctatttgct
2221 gaagaaggta tagaggaaca agttttaaaa gacttgaagc agctctggga aaccaaggtt
2281 ttgcagtcta aagcaacaga agacttcttc agaaatagca tccaatcacc tctgtttact
2341 cttcagttgc cgcacagctt gcaccaaaca ttgcaatcgt caacagcatc attagttatt
2401 cctgctggta gaactcttcc aagttttacc acagcagaac tgggcacttc aaactccagt
2461 gcaaacttta cttttcctgg ttatcccatt catgtaccag caggtgtgac actacagact
2521 gtatctggtc acctttataa agtcaatgta ccaattatgg tgacagagac ttctggaaga
2581 gcaggtattc ttcagcatcc aattcagcaa gtatttcaac agcttggcca gccttcagta
2641 atacaaacta gtgttccaca attgaatcca tggtctcttc aagcaactac tgaaaaatca
2701 cagagaattg aaaccgtgct acagcaaccc gcaattctac cttctgggcc agtagatagg
2761 aaacacttag aaaatgccac cagtgatata cttgtatctc ctggaaatga gcataaaatc
2821 gtgcctgaag ctttgttgtg tcatcaggaa agttctcact atatcagtct tccaggtgtt
2881 gtattttctc cacaggtctc tcaaacaaat tctaatgtgg agtcagtgct cagtggttca
2941 gctagcatgg ctcaaaatct gcatgatgag tccctctcca caagccctca tggggctctc
3001 caccagcacg tgactgatat tcagcttcat attcttaaaa ataggatgta tggatgtgat
3061 tctgtaaagc aaccaagaaa tatagaggaa cccagcaaca tacctgtatc agagaaggat
3121 tctaattctc aggtggattt aagcattcgg gttactgatg atgatattgg tgaaataatt
3181 caagtagatg gaagcggtga tacatcttcc aatgaagaaa taggaagtac aagagatgca
3241 gatgagaatg aatttctagg gaatattgac gggggagatc tgaaggtacc tgaagaagaa
3301 gctgacagta tttcaaatga ggattcagcc acaaacagta gtgataatga agaccctcaa
3361 gtaaacattg tagaagagga ccctttaaat tctggagatg atgttagtga acaggatgtg
3421 ccagacctgt ttgacacgga taatgtaatt gtctgtcagt atgataagat tcatcgaagc
3481 aagaacaaat ggaaattcta tttgaaagat ggtgttatgt gttttggagg gagagactat
3541 gtatttgcaa aagccattgg tgatgcagag tggtaaacct tgtgagctca gtacatctat
3601 tttgtgaaca tcagttggac tatattgcat attgtgaatt catttttatt ttgaatatag
3661 tccagcacag agctg
//