LOCUS BC101769 1855 bp mRNA linear HUM 21-JUL-2006
DEFINITION Homo sapiens potassium voltage-gated channel, Shaw-related
subfamily, member 4, mRNA (cDNA clone MGC:126818 IMAGE:8069275),
complete cds.
ACCESSION BC101769
VERSION BC101769.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1855)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1855)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (12-AUG-2005) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Ambion
cDNA Library Preparation: British Columbia Cancer Research Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRCB Plate: 2 Row: M Column: 17.
FEATURES Location/Qualifiers
source 1..1855
/db_xref="H-InvDB:HIT000337119"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:126818 IMAGE:8069275"
/tissue_type="Brain, PCR rescued clones"
/clone_lib="NIH_MGC_307"
/note="Vector: pCR4-TOPO with reversed insert; Clone
identification sequence tag: TTATACGT"
gene 1..1855
/gene="KCNC4"
/gene_synonym="HKSHIIIC"
/gene_synonym="KSHIIIC"
/gene_synonym="KV3.4"
/db_xref="GeneID:3749"
/db_xref="HGNC:HGNC:6236"
/db_xref="MIM:176265"
CDS 58..1806
/gene="KCNC4"
/gene_synonym="HKSHIIIC"
/gene_synonym="KSHIIIC"
/gene_synonym="KV3.4"
/codon_start=1
/product="potassium voltage-gated channel, Shaw-related
subfamily, member 4"
/protein_id="AAI01770.1"
/db_xref="GeneID:3749"
/db_xref="HGNC:HGNC:6236"
/db_xref="MIM:176265"
/translation="MISSVCVSSYRGRKSGNKPPSKTCLKEEMAKGEASEKIIINVGG
TRHETYRSTLRTLPGTRLAWLADPDGGGRPETDGGGVGSSGSSGGGGCEFFFDRHPGV
FAYVLNYYRTGKLHCPADVCGPLFEEELTFWGIDETDVEPCCWMTYRQHRDAEEALDI
FESPDGGGSGAGPSDEAGDDERELALQRLGPHEGGAGHGAGSGGCRGWQPRMWALFED
PYSSRAARVVAFASLFFILVSITTFCLETHEAFNIDRNVTEILRVGNITSVHFRREVE
TEPILTYIEGVCVLWFTLEFLVRIVCCPDTLDFVKNLLNIIDFVAILPFYLEVGLSGL
SSKAARDVLGFLRVVRFVRILRIFKLTRHFVGLRVLGHTLRASTNEFLLLIIFLALGV
LIFATMIYYAERIGARPSDPRGNDHTDFKNIPIGFWWAVVTMTTLGYGDMYPKTWSGM
LVGALCALAGVLTIAMPVPVIVNNFGMYYSLAMAKQKLPKKRKKHVPRPAQLESPMYC
KSEETSPRDSTCSDTSPPAREEGMIERKRAGEIRGWEGKSLFPQWPREFPNGPQTLGF
GMCFVWGFPKHKDVPL"
BASE COUNT 332 a 580 c 594 g 349 t
ORIGIN
1 gggaagggtg tttggagggc agcggccgcc ccaagccgga gccccgcagc gcttcttatg
61 atcagctcgg tgtgtgtctc ctcctaccgc gggcgcaagt cggggaacaa gcctccgtcc
121 aaaacatgtc tgaaggagga gatggccaag ggcgaggcgt cggagaagat catcatcaac
181 gtgggcggca cgcgacatga gacctaccgc agcaccctgc gcaccctacc gggaacccgc
241 ctcgcctggc tggccgaccc cgacggcggg ggccggcccg agaccgatgg cggcggtgtg
301 ggtagcagcg gcagcagcgg cggcgggggc tgcgagttct tcttcgacag gcacccgggc
361 gtcttcgcct acgtgctcaa ctactaccgc accggcaagc tgcactgccc cgcggacgtg
421 tgcgggccgc tcttcgaaga ggagctcacc ttctggggca tcgacgagac cgacgtggaa
481 ccctgctgct ggatgaccta ccggcagcac cgcgacgccg aggaggcgct cgacatcttc
541 gagagcccgg acggaggcgg cagcggcgcg gggcccagcg acgaggccgg cgacgatgag
601 cgggagctgg ccctgcagcg actgggcccc cacgagggag gcgcgggcca tggcgccggg
661 tctgggggct gccgcggctg gcagccccgc atgtgggcgc tcttcgagga tccctactcc
721 tcccgggccg ctagggtagt ggcctttgcc tctctcttct tcatcctggt ctccatcacc
781 actttctgcc tggagaccca tgaggccttt aatatcgacc gcaacgtgac agagatcctc
841 cgcgtaggga acatcaccag cgtgcacttc cggcgggagg tagagacaga gcccatcctg
901 acctacatcg agggcgtatg tgtgctgtgg ttcacactgg agttcctggt gcgcatcgtg
961 tgctgccccg acacgctgga cttcgtcaag aacctgctca acatcatcga ctttgtggcc
1021 atcctgccct tctacctgga ggtggggctg agcggcctgt catccaaggc ggcccgcgac
1081 gtgctgggct tcctgcgcgt ggtgcgcttc gtgcgcatcc tgcgtatctt caagctcaca
1141 cgccacttcg tggggctacg cgtgctgggc cacaccctga gggccagcac caatgagttc
1201 ctgctgctta tcatcttcct ggccctgggt gtgctcatct ttgccaccat gatctactac
1261 gctgagcgca ttggggccag gccctccgac cctcggggta atgaccacac cgacttcaag
1321 aacatcccca ttggcttctg gtgggctgtg gtcaccatga cgacactggg ctacggagac
1381 atgtacccca agacgtggtc aggcatgctg gtaggggcac tgtgtgcact ggctggcgtg
1441 ctcaccatcg ccatgccggt gcctgtcatc gtcaacaact tcggcatgta ctactccctg
1501 gccatggcca agcagaagct gcccaagaaa cggaagaagc acgtgccacg gccggcgcag
1561 ctggagtcac ccatgtactg caagtctgag gagacttccc cccgggacag cacctgcagt
1621 gataccagcc cccctgcccg ggaagagggt atgatcgaga ggaaacgggc aggtgagatt
1681 aggggttggg aaggaaaatc ccttttcccc cagtggccta gggagtttcc aaatggacct
1741 cagaccttgg gatttggcat gtgttttgtg tggggcttcc ctaagcataa agatgtgcct
1801 ttatgagggc aaagtgttga ggccgaattt ctctgtcctc tggctgggtc tccga
//