LOCUS BC101766 3920 bp mRNA linear HUM 09-JUN-2008
DEFINITION Homo sapiens zinc finger and AT hook domain containing, mRNA (cDNA
clone MGC:126815 IMAGE:8069272), complete cds.
ACCESSION BC101766
VERSION BC101766.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3920)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3920)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (12-AUG-2005) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Mike Brownstein, NIMH
cDNA Library Preparation: British Columbia Cancer Research Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRCB Plate: 2 Row: M Column: 14.
FEATURES Location/Qualifiers
source 1..3920
/db_xref="H-InvDB:HIT000337116"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:126815 IMAGE:8069272"
/tissue_type="Brain, cerebellum, PCR rescued clones"
/clone_lib="NIH_MGC_311"
/note="Vector: pCR4-TOPO with reversed insert; Clone
identification sequence tag: AGCCACCT"
gene 1..3920
/gene="ZFAT"
/gene_synonym="AITD3"
/db_xref="GeneID:57623"
/db_xref="HGNC:HGNC:19899"
/db_xref="MIM:610931"
CDS 100..3831
/gene="ZFAT"
/gene_synonym="AITD3"
/codon_start=1
/product="zinc finger and AT hook domain containing"
/protein_id="AAI01767.1"
/db_xref="GeneID:57623"
/db_xref="HGNC:HGNC:19899"
/db_xref="MIM:610931"
/translation="METRAAENTAIFMCKCCNLFSPNQSELLSHVSEKHMEEGVNVDE
IIIPLRPLSTPEPPNSSKTGDEFLVMKRKRGRPKGSTKKSSTEEELAENIVSPTEDSP
LAPEEGNSLPPSSLECSKCCRKFSNTRQLRKHICIIVLNLGEEEGEAGNESDLELEKK
CKEDDREKASKRPRSQKTEKVQKISGKEARQLSGAKKPIISVVLTAHEAIPGATKIVP
VEAGPPETGATNSETTSADLVPRRGYQEYAIQQTPYEQPMKSSRLGPTQLKIFTCEYC
NKVFKFKHSLQAHLRIHTNEKPYKCPQCSYASAIKANLNVHLRKHTGEKFACDYCSFT
CLSKGHLKVHIERVHKKIKQHCRFCKKKYSDVKNLIKHIRDAHDPQDKKVKEALDELC
LMTREGKRQLLYDCHICERKFKNELDRDRHMLVHGDKWPFACELCGHGATKYQALELH
VRKHPFVYVCAVCRKKFVSSIRLRTHIKEVHGAAQEALVFTSSINQSFCLLEPGGDIQ
QEALGDQLQLVEEEFALQGVNALKEEACPGDTQLEEGRKEPEAPGEMPAPAVHLASPQ
AESTALPPCELETTVVSSSDLHSQEVVSDDFLLKNDTSSAEAHAAPEKPPDMQHRSSV
QTQGEVITLLLSKAQSAGSDQESHGAQSPLGEGQNMAVLSAGDPDPSRCLRSNPAEAS
DLLPPVAGGGDTITHQPDSCKAAPEHRSGITAFMKVLNSLQKKQMNTSLCERIRKVYG
DLECEYCGKLFWYQVHFDMHVRTHTREHLYYCSQCHYSSITKNCLKRHVIQKHSNILL
KCPTDGCDYSTPDKYKLQAHLKVHTALDKRSYSCPVCEKSFSEDRLIKSHIKTNHPEV
SMSTISEVLGRRVQLKGLIGKRAMKCPYCDFYFMKNGSDLQRHIWAHEGVKPFKCSLC
EYATRSKSNLKAHMNRHSTEKTHLCDMCGKKFKSKGTLKSHKLLHTADGKQFKCTVCD
YTAAQKPQLLRHMEQHVSFKPFRCAHCHYSCNISGSLKRHYNRKHPNEEYANVGTGEL
AAEVLIQQGGLKCPVCSFVYGTKWEFNRHLKNKHGLKVVEIDGDPKWETATEAPEEPS
TQYLHITEAEEDVQGTQAAVAALQDLRYTSESGDRLDPTAVNILQQIIELGAETHDAT
ALASVVAMAPGTVTVVKQVTEEEPSSNHTVMIQETVQQASVELAEQHHLVVSSDDVEG
IETVTVYTQGGEASEFIVYVQEAMQPVEEQAVEQPAQEL"
BASE COUNT 1018 a 1059 c 1092 g 751 t
ORIGIN
1 aaagcgaagc gtcagcaggg cgccccgccc cctcggtcgg cacgggaggg ggcccggaag
61 agcccgaggc ttttttttcc tccgcggtgg ggcgttgcca tggagacgcg ggcggcagaa
121 aacacggcca tctttatgtg taaatgttgt aacctcttct caccaaatca gtcggaactc
181 ctctcccacg tttcagagaa gcacatggaa gaaggggtta atgttgatga gattattatt
241 ccccttaggc ctctgagtac acctgaaccc cccaactcaa gcaaaaccgg agatgagttt
301 ttggtcatga agaggaagag aggcaggcct aaggggtcca cgaagaagtc cagcacagaa
361 gaggagctgg cagaaaacat cgtgagtccg actgaggaca gcccgctggc tccggaggaa
421 gggaacagcc tgcctccaag cagcttggag tgtagcaagt gctgtcggaa gttctccaac
481 acgcgccagc tgcggaagca catctgcatt atcgtgctga atttgggtga ggaggaagga
541 gaagcaggta acgagtctga ccttgaacta gaaaagaagt gtaaggaaga tgatcgggaa
601 aaagcctcga aaagaccacg gtcacagaaa acagagaaag tccagaagat ctcaggaaag
661 gaggccagac agctttctgg ggcgaagaaa cccatcataa gtgtggtttt aactgcacac
721 gaagcaattc caggtgctac caagattgtg ccagtggagg ctgggccccc tgaaacagga
781 gctacaaatt ctgagaccac ttcagcagac ctggtgcctc ggagaggcta ccaggaatac
841 gccattcagc agacacctta tgagcaacca atgaagtcaa gcaggctagg tcccactcag
901 ctcaaaatct tcacttgtga atactgcaac aaggtcttca agttcaagca ctcgctgcag
961 gcccacctga ggatccacac caatgaaaag ccatacaagt gcccccagtg cagctatgcc
1021 agtgccatca aggccaacct caatgtgcac ctgcgcaagc acactggaga gaagttcgcc
1081 tgcgactact gctcgttcac ctgcctgagc aagggccacc tcaaggtgca catcgagcga
1141 gtgcacaaga agatcaagca gcactgccgc ttctgcaaga agaagtactc tgacgtcaag
1201 aacctcatca agcacatccg agacgcgcat gacccacagg acaagaaggt caaagaggcc
1261 ttggacgagc tctgcctgat gacgagggag ggcaagcggc agctgctcta tgactgccac
1321 atctgtgagc gcaagttcaa gaacgagctg gaccgcgacc gccatatgct ggtccacgga
1381 gacaagtggc cttttgcctg tgagctctgt ggccatgggg ccaccaagta ccaggcgctg
1441 gaactgcatg tcaggaagca ccccttcgtg tacgtctgtg ccgtctgccg caagaagttc
1501 gtcagctcca tcaggctgcg cacccacatc aaagaggtgc acggggctgc ccaggaggcc
1561 ttggtcttca ccagttccat caaccagagc ttctgcctcc tggaacctgg tggggacatc
1621 cagcaagaag ctctggggga ccagctacag ctggtggaag aggagtttgc cctccagggc
1681 gtgaatgcac tcaaggaaga ggcctgtcct ggggacactc agctggagga gggccggaag
1741 gagccggagg cccctgggga aatgcctgcc ccagctgtgc acctggcctc cccgcaggcc
1801 gaaagcacag ccctgccacc ctgtgagctg gaaaccaccg tggtctcctc ctcagacctg
1861 cattctcaag aggtggtttc agatgatttt ttgttgaaaa atgatacctc ctccgcagag
1921 gctcatgctg ctcctgagaa gcccccagac atgcagcaca gaagctcagt ccagacgcaa
1981 ggtgaagtga tcacactact gctgtccaag gcccagagtg ctgggtcaga tcaggaaagc
2041 catggcgccc agagccccct aggggaaggg cagaacatgg ctgtgctttc agctggtgac
2101 ccagatccca gcaggtgtct caggtcaaac ccagctgagg cctcagacct cctccctcca
2161 gtagctggtg gtggggacac catcacacat cagcctgact cttgcaaagc tgcccctgag
2221 caccggtcag gcatcaccgc tttcatgaag gtcctgaaca gtttacagaa gaagcaaatg
2281 aacaccagct tgtgtgagcg gatccggaag gtttatggag acctggagtg tgaatactgt
2341 ggcaaacttt tttggtacca agtgcatttt gatatgcatg tccgcaccca cacccgggaa
2401 catctgtatt attgctctca gtgtcattat tcttccatca ccaaaaactg ccttaaacgc
2461 cacgtaattc agaaacacag taacatcttg ctgaagtgtc ccaccgacgg ctgtgactac
2521 tcaactccag ataaatataa gctacaggca catcttaaag ttcacacagc actggacaaa
2581 aggagttatt cctgtcctgt ttgtgaaaag tctttttcag aggatcgatt gataaagtca
2641 catatcaaga ccaaccatcc tgaggtctcc atgagcacca tttctgaggt tctcgggagg
2701 agggttcagc tgaaagggct aattggaaag agagccatga aatgcccata ttgtgacttt
2761 tatttcatga agaatggctc agaccttcag cgtcatattt gggctcatga aggtgtgaag
2821 cccttcaagt gttctttgtg tgagtatgca actcgtagca agagtaacct caaggctcat
2881 atgaatcgtc acagcactga gaaaacccac ctatgtgaca tgtgtggcaa gaaattcaaa
2941 tcaaaaggga cactgaaaag tcacaaactc cttcacactg cagatgggaa gcagtttaag
3001 tgcacggtgt gtgactacac agcggcccag aagccacagc tgctgcggca catggaacag
3061 catgtctcct tcaagccttt ccgctgtgcc cattgccatt actcctgcaa catatctggc
3121 tctctgaagc ggcactacaa caggaagcac cctaatgagg agtatgccaa cgtgggcacc
3181 ggggagctgg cagcggaggt gctcatccag caaggtggtt tgaagtgtcc tgtttgcagc
3241 tttgtatatg gcaccaaatg ggagttcaat aggcacttga agaacaaaca tggcttgaag
3301 gtggtggaaa ttgatggaga ccccaagtgg gagacagcaa cagaagctcc tgaggagccc
3361 tccacccagt atctccacat cacagaggcc gaagaagacg ttcaagggac acaggcagcg
3421 gtggccgcgc tccaggacct gagatacacc tctgagagtg gcgaccgact ggaccccacg
3481 gccgtgaaca tcctgcagca gatcattgag ctgggcgccg agacccatga cgccactgcc
3541 cttgcctcgg tggttgccat ggcaccaggg acggtgactg tggttaagca ggtcaccgag
3601 gaggagccca gctccaacca cacggtcatg atccaggaga cggtccagca agcgtccgtg
3661 gagcttgccg agcagcacca cctggtggtg tcctccgacg acgtggaggg cattgagacg
3721 gtgactgtct acacgcaggg cggggaggcc tcggagttca tcgtctacgt gcaggaggcc
3781 atgcagcctg tggaggagca ggctgtggag cagccggccc aggaactcta gaggacatgt
3841 ggcatcggat ggccacaggg cggggctgcc aggctctgca ggcacccagg gtggggaggc
3901 cacccttcct gccctacccg
//