LOCUS BC101738 1405 bp mRNA linear HUM 21-JUL-2006
DEFINITION Homo sapiens zinc finger and SCAN domain containing 4, mRNA (cDNA
clone MGC:126787 IMAGE:8069244), complete cds.
ACCESSION BC101738
VERSION BC101738.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1405)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1405)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (12-AUG-2005) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Mike Brownstein
cDNA Library Preparation: British Columbia Cancer Research Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRCB Plate: 2 Row: L Column: 10.
FEATURES Location/Qualifiers
source 1..1405
/db_xref="H-InvDB:HIT000337089"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:126787 IMAGE:8069244"
/tissue_type="Cerebellum, Uterus, Testis, PCR rescued
clones"
/clone_lib="NIH_MGC_337"
/lab_host="DH10B"
/note="Vector: pCR4-TOPO; Clone identification sequence
tag: ATGTGTAT"
gene 1..1405
/gene="ZSCAN4"
/gene_synonym="FLJ35105"
/db_xref="GeneID:201516"
/db_xref="HGNC:HGNC:23709"
CDS 89..1390
/gene="ZSCAN4"
/gene_synonym="FLJ35105"
/codon_start=1
/product="zinc finger and SCAN domain containing 4"
/protein_id="AAI01739.1"
/db_xref="GeneID:201516"
/db_xref="HGNC:HGNC:23709"
/translation="MALDLRTIFQCEPSENNLGSENSAFQQSQGPAVQREEGISEFSR
MVLNSFQDSNNSYARQELQRLYRIFHSWLQPEKHSKDEIISLLVLEQFMIGGHCNDKA
SVKEKWKSSGKNLERFIEDLTDDSINPPALVHVHMQGQEALFSEDMPLRDVIVHLTKQ
VNAQTTREANMGTPSQTSQDTSLETGQGYEDEQDGWNSSSKTTRVNENITNQGNQIVS
LIIIQEENGPRPEEGGVSSDNPYNSKRAELVTARSQEGSINGITFQGVPMVMGAGCIS
QPEQSSPESALTHQSNEGNSTCEVHQKGSHGVQKSYKCEECPKVFKYLCHLLAHQRRH
RNERPFVCPECQKGFFQISDLRVHQIIHTGKKPFTCSMCKKSFSHKTNLRSHERIHTG
EKPYTCPFCKTSYRQSSTYHRHMRTHEKITLPSVPSTPEAS"
BASE COUNT 472 a 321 c 292 g 320 t
ORIGIN
1 tccaccaact gttgaaacaa atccctagag acacaaggca agagactgaa tcatcaaagt
61 aaagtctctc tgagaattat tgctaagaat ggctttagat ctaagaacca tatttcagtg
121 tgaaccatcc gagaataatc ttggatcaga aaattcagcg tttcaacaaa gccaaggacc
181 tgctgttcag agagaagaag ggatttctga gttctcaaga atggtgctca attcatttca
241 agacagcaat aattcatatg caaggcagga attgcaaaga ctttatagga tctttcactc
301 atggctgcaa ccagaaaagc acagcaagga tgaaattatt tctctattag tcctggagca
361 gtttatgatt ggtggccact gcaatgacaa agccagtgtg aaagagaaat ggaaatcaag
421 tggcaaaaac ttggagagat tcatagaaga cctgactgat gacagcataa atccacctgc
481 cttagtccac gtccacatgc agggacagga agctctcttt tctgaggata tgcccttaag
541 agatgtcatt gttcatctca caaaacaagt gaatgcccaa accacaagag aagcaaacat
601 ggggacaccc tcccagactt cccaagatac ttccttagaa acaggacaag gatatgaaga
661 tgaacaagat ggctggaaca gttcttcgaa aactactcga gtaaatgaaa atattactaa
721 tcaaggcaat caaatagttt ccctaatcat catccaggaa gagaacggtc ctaggcctga
781 agagggaggt gtttcttctg acaacccata caactcaaaa agagcagagc tagtcactgc
841 tagatctcag gaagggtcca taaatggaat cactttccaa ggtgtcccta tggtgatggg
901 agcagggtgt atctctcaac cagagcagtc ctcccctgag tctgccctta cccaccagag
961 caatgaggga aattccacat gtgaggtaca tcagaaagga tcccatggag tccaaaaatc
1021 atacaaatgt gaagaatgcc ccaaggtctt taagtatctc tgtcacttat tagctcacca
1081 gagaagacac aggaatgaga ggccatttgt ttgtcccgag tgtcaaaaag gcttcttcca
1141 gatatcagac ctacgggtgc atcagataat tcacacagga aagaagcctt tcacatgcag
1201 catgtgtaaa aagtccttca gccacaaaac caacctgcgg tctcatgaga gaatccacac
1261 aggagaaaag ccttatacat gtcccttttg taagacaagc taccgccagt catccacata
1321 ccaccgccat atgaggactc atgagaaaat taccctgcca agtgttccct ccacaccaga
1381 agcttcctaa gctgctggtc tgata
//