LOCUS BC101667 1315 bp mRNA linear HUM 19-MAR-2007
DEFINITION Homo sapiens astrotactin 2, mRNA (cDNA clone IMAGE:8069173),
complete cds.
ACCESSION BC101667
VERSION BC101667.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1315)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1315)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (12-AUG-2005) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Mike Brownstein, NIMH
cDNA Library Preparation: British Columbia Cancer Research Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRCB Plate: 2 Row: I Column: 11
This clone has the following problem: The cds is short compared to
the longest cds in the locus.
FEATURES Location/Qualifiers
source 1..1315
/db_xref="H-InvDB:HIT000386381"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:8069173"
/tissue_type="Colon, PCR rescued clones"
/clone_lib="NIH_MGC_295"
/note="Vector: pCR4-TOPO with reversed insert; Clone
identification sequence tag: CGGCCTTT"
gene 1..1315
/gene="ASTN2"
/gene_synonym="bA67K19.1"
/db_xref="GeneID:23245"
/db_xref="HGNC:HGNC:17021"
CDS 70..1257
/gene="ASTN2"
/gene_synonym="bA67K19.1"
/codon_start=1
/product="astrotactin 2"
/protein_id="AAI01668.1"
/db_xref="GeneID:23245"
/db_xref="HGNC:HGNC:17021"
/translation="MPFITYLSGLLTAQMLSDDQLISGVEIRCEEKGRCPSTCHLCRR
PGKEQLSPTPVLLEINRVVPLYTLIQDNGTKEAFKSALMSSYWCSGKGDVIDDWCRCD
LSAFDANGLPNCSPLLQPVLRLSPTVEPSSTVVSLEWVDVQPAIGTKVSDYILQHKKV
DEYTDTDLYTGEFLSFADDLLSGLGTSCVAAGRSHGEVPEVSIYSVIFKCLEPDGLYK
FTLYAVDTRGRHSELSTVTLRTACPLVDDNKAEEIADKIYNLYNGYTSGKEQQMAYNT
LMEVSASMLFRVQHHYNSHYEKFGDFVWRSEDELGPRKAHLILRRLERVSSHCSSLLR
SAYIQSRVETVPYLFCRSEEVRPAGMVWYSILKDTKITCEEKMVSMARNTYYLTLSKV
SPF"
BASE COUNT 321 a 341 c 363 g 290 t
ORIGIN
1 tgggcgaaag ggacctgctc aagttcactc aagaccacag agctgggcag caagaaggag
61 ctcaagtcca tgcccttcat cacctacctc tcaggtttgc tgacagccca gatgctgtca
121 gatgaccagc tcatttcagg tgtggagatt cgctgtgagg agaaggggcg ctgtccatct
181 acctgtcacc tttgccgccg gccaggcaag gagcagctga gccccacacc agtgctgctg
241 gaaatcaacc gtgtggtgcc actttatacc ctcatccaag acaatggcac aaaggaggcc
301 ttcaagagtg cactgatgag ttcctactgg tgctcaggga aaggggatgt gatcgatgac
361 tggtgcaggt gtgacctcag cgcctttgat gccaatgggc tccccaactg cagccccctt
421 ctgcagccgg tgctgcggct gtccccaaca gtggagccct ccagtactgt ggtctccttg
481 gagtgggtgg atgttcagcc agctattggg accaaggtct ccgactatat tctgcagcat
541 aagaaagtgg atgaatacac agacactgac ctgtacacag gagaattcct gagttttgct
601 gatgacttac tctctggcct gggcacatct tgtgtagcag ctggtcgaag ccatggagag
661 gtccctgaag tcagtatcta ctcagtcatc ttcaagtgtc tggagcccga cggtctctac
721 aagttcactc tgtatgctgt ggatacacga gggaggcact cagagctaag cacggtgacc
781 ctgaggacgg cctgtccact ggtagatgac aacaaggcag aagaaatagc tgacaagatc
841 tacaatctgt acaatgggta cacaagtgga aaggagcagc agatggccta caacacactg
901 atggaggtct cagcctcgat gctgttccga gtccagcacc actacaactc tcactatgaa
961 aagtttggcg acttcgtctg gagaagtgag gatgagctgg ggcccaggaa ggcccacctg
1021 attctacggc gactggagag ggtgagtagc cactgctcca gcctcctgcg gagtgcctac
1081 atccagagcc gcgtggaaac agtgccctat cttttctgcc gcagcgagga ggtccggcct
1141 gcaggcatgg tgtggtatag catcctcaag gacaccaaaa tcacgtgtga ggagaagatg
1201 gtgtcaatgg cccgaaacac atattatttg actctatcaa aagtctctcc tttttaaacc
1261 ttttcttatg gatggctgtc aatcccgagg cagaagtttt caggtggaga ccaag
//