LOCUS BC101623 1716 bp mRNA linear HUM 06-OCT-2005
DEFINITION Homo sapiens myotubularin related protein 9, mRNA (cDNA clone
MGC:126672 IMAGE:8069129), complete cds.
ACCESSION BC101623
VERSION BC101623.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1716)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1716)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (12-AUG-2005) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Mike Brownstein, NIMH
cDNA Library Preparation: British Columbia Cancer Research Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRCB Plate: 2 Row: G Column: 15.
FEATURES Location/Qualifiers
source 1..1716
/db_xref="H-InvDB:HIT000336981"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:126672 IMAGE:8069129"
/tissue_type="Liver, PCR rescued clones"
/clone_lib="NIH_MGC_291"
/note="Vector: pCR4-TOPO with reversed insert; Clone
identification sequence tag: ACACTTCT"
gene 1..1716
/gene="MTMR9"
/gene_synonym="DKFZp434K171"
/gene_synonym="LIP-STYX"
/db_xref="GeneID:66036"
/db_xref="HGNC:HGNC:14596"
/db_xref="IMGT/GENE-DB:14596"
/db_xref="MIM:606260"
CDS 44..1693
/gene="MTMR9"
/gene_synonym="DKFZp434K171"
/gene_synonym="LIP-STYX"
/codon_start=1
/product="myotubularin-related protein 9"
/protein_id="AAI01624.1"
/db_xref="GeneID:66036"
/db_xref="HGNC:HGNC:14596"
/db_xref="IMGT/GENE-DB:14596"
/db_xref="MIM:606260"
/translation="MEFAELIKTPRVDNVVLHRPFYPAVEGTLCLTGHHLILSSRQDN
TEELWLLHSNIDAIDKRFVGSLGTIIIKCKDFRIIQLDIPGMEECLNIASSIEALSTL
DSITLMYPFFYRPMFEVIEDGWHSFLPEQEFELYSSATSEWRLSYVNKEFAVCPSYPP
IVTVPKSIDDEALRKVATFRHGGRFPVLSYYHKKNGMVIMRSGQPLTGTNGRRCKEDE
KLINATLRAGKRGYIIDTRSLNVAQQTRAKGGGFEQEAHYPQWRRIHKSIERYHILQE
SLIKLVEACNDQTHNMDRWLSKLEASNWLTHIKEILTTACLAAQCIDREGASILIHGT
EGTDSTLQVTSLAQIILEPRSRTIRGFEALIEREWLQAGHPFQQRCAQSAYCNTKQKW
EAPVFLLFLDCVWQILRQFPCSFEFNENFLIMLFEHAYASQFGTFLGNNESERCKLKL
QQKTMSLWSWVNQPSELSKFTNPLFEANNLVIWPSVAPQSLPLWEGIFLRWNRSSKYL
DEAYEEMVNIIEYNKELQAKVNILRRQLAELETEDGMQESP"
BASE COUNT 456 a 406 c 421 g 433 t
ORIGIN
1 cacctaccgg gctcggttcc ctggctccgg ccgcgggggg agcatggagt ttgcggagct
61 gattaagacc ccgcgggtgg acaatgtggt gctgcaccgg cctttctacc cggctgtcga
121 gggcaccctg tgcctgacgg gccaccactt gatcctgtcc tcccggcagg acaatacgga
181 ggagctgtgg ctcctccatt caaacatcga cgccatcgac aagcgatttg taggatcact
241 gggtaccatc atcataaaat gtaaagattt tcgaattatt cagttggata ttcctggaat
301 ggaggaatgc ttgaatatag ccagttccat tgaggcattg tctactctgg actccatcac
361 tctgatgtac cctttctttt accgtcctat gtttgaagtg atagaagatg gctggcattc
421 cttccttcct gagcaagaat ttgaactcta ttcttcagct accagtgaat ggaggctaag
481 ctatgtcaat aaggaatttg ctgtctgtcc ctcttaccca ccaattgtca cagtgcccaa
541 atccatcgat gatgaagctc ttcggaaggt agctacattt cgacatggag ggcgcttccc
601 agtactaagc tattaccaca aaaaaaatgg gatggtaatt atgcgaagtg gtcagccact
661 cactggtaca aacgggagga ggtgcaagga ggacgagaag ctgataaatg ctaccctcag
721 ggctggaaag cgtggctaca tcattgacac ccgatccctg aacgtggctc agcaaactag
781 agccaaagga ggtggctttg aacaagaagc tcattatcct cagtggaggc gaattcataa
841 gtccattgag aggtatcaca ttcttcagga gagcttaatc aaacttgtgg aagcttgtaa
901 tgaccaaaca cataacatgg accgatggct cagtaaattg gaagcctcta actggctgac
961 tcacatcaaa gagattctga caactgcctg cctagcggct cagtgcatcg acagggaagg
1021 agcatcaata ttgattcacg gaacagaagg aactgattcc acactccagg tgacctcctt
1081 ggcccagatc atcttagagc caagaagcag gaccattcgt ggttttgagg ccctgattga
1141 aagagagtgg ctgcaggctg gtcacccatt ccagcagcgc tgtgcacagt cagcctactg
1201 taacaccaag cagaagtggg aggctcctgt atttcttctc ttcttggact gcgtgtggca
1261 gatccttcgt cagtttccct gttcttttga gtttaatgag aatttcctca tcatgctctt
1321 tgagcatgct tatgcctcac agtttggaac atttctgggc aacaatgaaa gtgaaagatg
1381 taagttgaag ctacagcaga agacgatgtc tttgtggtcc tgggttaatc agcccagtga
1441 gctgagtaaa ttcaccaatc ccctctttga agccaacaac cttgtcatct ggccttcagt
1501 tgctccgcag agtcttccac tgtgggaagg tattttccta cgttggaata gatcctctaa
1561 gtatttggat gaagcatatg aagaaatggt taacatcatt gaatataata aagaattaca
1621 agcaaaagtc aatatccttc gaaggcagtt ggcagaactg gaaacagagg acgggatgca
1681 ggagagtccc tgaaaggtct cctcgcaccc ttcgca
//