LOCUS BC101580 1456 bp mRNA linear HUM 21-JUL-2006
DEFINITION Homo sapiens GATA binding protein 4, mRNA (cDNA clone MGC:126629
IMAGE:8069086), complete cds.
ACCESSION BC101580
VERSION BC101580.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1456)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1456)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (12-AUG-2005) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Mike Brownstein, NIMH
cDNA Library Preparation: British Columbia Cancer Research Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRCB Plate: 2 Row: E Column: 20.
FEATURES Location/Qualifiers
source 1..1456
/db_xref="H-InvDB:HIT000336941"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:126629 IMAGE:8069086"
/tissue_type="Lung and heart, PCR rescued clones"
/clone_lib="NIH_MGC_315"
/note="Vector: pCR4-TOPO with reversed insert; Clone
identification sequence tag: ATGACGTA"
gene 1..1456
/gene="GATA4"
/db_xref="GeneID:2626"
/db_xref="HGNC:HGNC:4173"
/db_xref="MIM:600576"
CDS 81..1409
/gene="GATA4"
/codon_start=1
/product="GATA binding protein 4"
/protein_id="AAI01581.1"
/db_xref="GeneID:2626"
/db_xref="HGNC:HGNC:4173"
/db_xref="MIM:600576"
/translation="MYQSLAMAANHGPPPGAYEAGGPGAFMHGAGAASSPVYVPTPRV
PSSVLGLSYLQGGGAGSASGGASGGSSGGAASGAGPGTQQGSPGWSQAGADGAAYTPP
PVSPRFSFPGTTGSLAAAAAAAAAREAAAYSSGGGAAGAGLAGREQYGRAGFAGSYSS
PYPAYMADVGASWAAAAAASAGPFDSPVLHSLPGRANPAARHPNLDMFDDFSEGRECV
NCGAMSTPLWRRDGTGHYLCNACGLYHKMNGINRPLIKPQRRLSASRRVGLSCANCQT
TTTTLWRRNAEGEPVCNACGLYMKLHGVPRPLAMRKEGIQTRKRKPKNLNKSKTPAAP
SGSESLPPASGASSNSSNATTSSSEEMRPIKTEPGLSSHYGHSSSVSQTFSVSAMSGH
GPSIHPVLSALKLSPQGYASPVSQSPQTSSKQDSWNSLVLADSHGDIITA"
BASE COUNT 237 a 544 c 451 g 224 t
ORIGIN
1 gccgtcgttt tctctccccg cgtggctcct tgacctgcga gggagagaga ggacaccgaa
61 gccgggagct cgcagggacc atgtatcaga gcttggccat ggccgccaac cacgggccgc
121 cccccggtgc ctacgaggcg ggcggccccg gcgccttcat gcacggcgcg ggcgccgcgt
181 cctcgccagt ctacgtgccc acaccgcggg tgccctcctc cgtgctgggc ctgtcctacc
241 tccagggcgg aggcgcgggc tctgcgtccg gaggcgcctc gggcggcagc tccggtgggg
301 ccgcgtctgg tgcggggccc gggacccagc agggcagccc gggatggagc caggcgggag
361 ccgacggagc cgcttacacc ccgccgccgg tgtcgccgcg cttctccttc ccggggacca
421 ccgggtccct ggcggccgcc gccgccgctg ccgcggcccg ggaagctgcg gcctacagca
481 gtggcggcgg agcggcgggt gcgggcctgg cgggccgcga gcagtacggg cgcgccggct
541 tcgcgggctc ctactccagc ccctacccgg cttacatggc cgacgtgggc gcgtcctggg
601 ccgcagccgc cgccgcctcc gccggcccct tcgacagccc ggtcctgcac agcctgcccg
661 gccgggccaa cccggccgcc cgacacccca atctcgatat gtttgacgac ttctcagaag
721 gcagagagtg tgtcaactgt ggggctatgt ccaccccgct ctggaggcga gatgggacgg
781 gtcactatct gtgcaacgcc tgcggcctct accacaagat gaacggcatc aaccggccgc
841 tcatcaagcc tcagcgccgg ctgtccgcct cccgccgagt gggcctctcc tgtgccaact
901 gccagaccac caccaccacg ctgtggcgcc gcaatgcgga gggcgagcct gtgtgcaatg
961 cctgcggcct ctacatgaag ctccacgggg tccccaggcc tcttgcaatg cggaaagagg
1021 ggatccaaac cagaaaacgg aagcccaaga acctgaataa atctaagaca ccagcagctc
1081 cttcaggcag tgagagcctt cctcccgcca gcggtgcttc cagcaactcc agcaacgcca
1141 ccaccagcag cagcgaggag atgcgtccca tcaagacgga gcctggcctg tcatctcact
1201 acgggcacag cagctccgtg tcccagacgt tctcagtcag tgcgatgtct ggccatgggc
1261 cctccatcca ccctgtcctc tcggccctga agctctcccc acaaggctat gcgtctcccg
1321 tcagccagtc tccacagacc agctccaagc aggactcttg gaacagcctg gtcttggccg
1381 acagtcacgg ggacataatc actgcgtaat cttccctctt ccctcctcaa attcctgcac
1441 ggacctggga cttgga
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