LOCUS BC101574 2859 bp mRNA linear HUM 21-JUL-2006
DEFINITION Homo sapiens solute carrier family 4, anion exchanger, member 1
(erythrocyte membrane protein band 3, Diego blood group), mRNA
(cDNA clone MGC:126623 IMAGE:8069080), complete cds.
ACCESSION BC101574
VERSION BC101574.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2859)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2859)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (12-AUG-2005) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Mike Brownstein, NIMH
cDNA Library Preparation: British Columbia Cancer Research Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRCB Plate: 2 Row: E Column: 14.
FEATURES Location/Qualifiers
source 1..2859
/db_xref="H-InvDB:HIT000336935"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:126623 IMAGE:8069080"
/tissue_type="Brain, cerebellum, PCR rescued clones"
/clone_lib="NIH_MGC_311"
/note="Vector: pCR4-TOPO with reversed insert; Clone
identification sequence tag: TCCCCAAG"
gene 1..2859
/gene="SLC4A1"
/gene_synonym="BND3"
/gene_synonym="CD233"
/gene_synonym="EMPB3"
/gene_synonym="FR"
/gene_synonym="RTA1A"
/gene_synonym="SW"
/gene_synonym="WD1"
/gene_synonym="WR"
/db_xref="GeneID:6521"
/db_xref="HGNC:HGNC:11027"
/db_xref="MIM:109270"
CDS 83..2818
/gene="SLC4A1"
/gene_synonym="BND3"
/gene_synonym="CD233"
/gene_synonym="EMPB3"
/gene_synonym="FR"
/gene_synonym="RTA1A"
/gene_synonym="SW"
/gene_synonym="WD1"
/gene_synonym="WR"
/codon_start=1
/product="solute carrier family 4, anion exchanger, member
1 (erythrocyte membrane protein band 3, Diego blood
group)"
/protein_id="AAI01575.1"
/db_xref="GeneID:6521"
/db_xref="HGNC:HGNC:11027"
/db_xref="MIM:109270"
/translation="MEELQDDYEDMMEENLEQEEYEDPDIPESQMEEPAAHDTEATAT
DYHTTSHPGTHKVYVELQELVMDEKNQELRWMEAARWVQLEENLGENGAWGRPHLSHL
TFWSLLELRRVFTKGTVLLDLQETSLAGVANQLLDRFIFEDQIRPQDREELLRALLLK
HSHAGELEALGGVKPAVLTRSGDPSQPLLPQHSSLETQLFCEQGDGGTEGHSPSGILE
KIPPDSEATLVLVGRADFLEQPVLGFVRLQEAAELEAVELPVPIRFLFVLLGPEAPHI
DYTQLGRAAATLMSERVFRIDAYMAQSRGELLHSLEGFLDCSLVLPPTDAPSEQALLS
LVPVQRELLRRRYQSSPAKPDSSFYKGLDLNGGPDDPLQQTGQLFGGLVRDIRRRYPY
YLSDITDAFSPQVLAAVIFIYFAALSPAITFGGLLGEKTRNQMGVSELLISTAVQGIL
FALLGAQPLLVVGFSGPLLVFEEAFFSFCETNGLEYIVGRVWIGFWLILLVVLVVAFE
GSFLVRFISRYTQEIFSFLISLIFIYETFSKLIKIFQDHPLQKTYNYNVLMVPKPQGP
LPNTALLSLVLMAGTFFFAMMLRKFKNSSYFPGKLRRVIGDFGVPISILIMVLVDFFI
QDTYTQKLSVPDGFKVSNSSARGWVIHPLGLRSEFPIWMMFASALPALLVFILIFLES
QITTLIVSKPERKMVKGSGFHLDLLLVVGMGGVAALFGMPWLSATTVRSVTHANALTV
MGKASTPGAAAQIQEVKEQRISGLLVAVLVGLSILMEPILSRIPLAVLFGIFLYMGVT
SLSGIQLFDRILLLFKPPKYHPDVPYVKRVKTWRMHLFTGIQIICLAVLWVVKSTPAS
LALPFVLILTVPLRRVLLPLIFRNVELQCLDADDAKATFDEEEGRDEYDEVAMPV"
BASE COUNT 533 a 895 c 815 g 616 t
ORIGIN
1 aggctcgtga gcagggaccc gcggtgcggg ttatgctggg ggctcagatc accgtagaca
61 actggacact caggaccacg ccatggagga gctgcaggat gattatgaag acatgatgga
121 ggagaatctg gagcaggagg aatatgaaga cccagacatc cccgagtccc agatggagga
181 gccggcagct cacgacaccg aggcaacagc cacagactac cacaccacat cacacccggg
241 tacccacaag gtctatgtgg agctgcagga gctggtgatg gacgaaaaga accaggagct
301 gagatggatg gaggcggcgc gctgggtgca actggaggag aacctggggg agaatggggc
361 ctggggccgc ccgcacctct ctcacctcac cttctggagc ctcctagagc tgcgtagagt
421 cttcaccaag ggtactgtcc tcctagacct gcaagagacc tccctggctg gagtggccaa
481 ccaactgcta gacaggttta tctttgaaga ccagatccgg cctcaggacc gagaggagct
541 gctccgggcc ctgctgctta aacacagcca cgctggagag ctggaggccc tggggggtgt
601 gaagcctgca gtcctgacac gctctgggga tccttcacag cctctgctcc cccaacactc
661 ctcactggag acacagctct tctgtgagca gggagatggg ggcacagaag ggcactcacc
721 atctggaatt ctggaaaaga ttcccccgga ttcagaggcc acgttggtgc tagtgggccg
781 cgccgacttc ctggagcagc cggtgctggg cttcgtgagg ctgcaggagg cagcggagct
841 ggaggcggtg gagctgccgg tgcctatacg cttcctcttt gtgttgctgg gacctgaggc
901 cccccacatc gattacaccc agcttggccg ggctgctgcc accctcatgt cagagagggt
961 gttccgcata gatgcctaca tggctcagag ccgaggggag ctgctgcact ccctagaggg
1021 cttcctggac tgcagcctag tgctgcctcc caccgatgcc ccctccgagc aggcactgct
1081 cagtctggtg cctgtgcaga gggagctact tcgaaggcgc tatcagtcca gccctgccaa
1141 gccagactcc agcttctaca agggcctaga cttaaatggg ggcccagatg accctctgca
1201 gcagacaggc cagctcttcg ggggcctggt gcgtgatatc cggcgccgct acccctatta
1261 cctgagtgac atcacagatg cattcagccc ccaggtcctg gctgccgtca tcttcatcta
1321 ctttgctgca ctgtcacccg ccatcacctt cggcggcctc ctgggagaaa agacccggaa
1381 ccagatggga gtgtcggagc tgctgatctc cactgcagtg cagggcattc tcttcgccct
1441 gctgggggct cagcccctgc ttgtggtcgg cttctcagga cccctgctgg tgtttgagga
1501 agccttcttc tcgttctgcg agaccaacgg tctagagtac atcgtgggcc gcgtgtggat
1561 cggcttctgg ctcatcctgc tggtggtgtt ggtggtggcc ttcgagggta gcttcctggt
1621 ccgcttcatc tcccgctata cccaggagat cttctccttc ctcatttccc tcatcttcat
1681 ctatgagact ttctccaagc tgatcaagat cttccaggac cacccactac agaagactta
1741 taactacaac gtgttgatgg tgcccaaacc tcagggcccc ctgcccaaca cagccctcct
1801 ctcccttgtg ctcatggccg gtaccttctt ctttgccatg atgctgcgca agttcaagaa
1861 cagctcctat ttccctggca agctgcgtcg ggtcatcggg gacttcgggg tccccatctc
1921 catcctgatc atggtcctgg tggatttctt cattcaggat acctacaccc agaaactctc
1981 ggtgcctgat ggcttcaagg tgtccaactc ctcagcccgg ggctgggtca tccacccact
2041 gggcttgcgt tccgagtttc ccatctggat gatgtttgcc tccgccctgc ctgctctgct
2101 ggtcttcatc ctcatattcc tggagtctca gatcaccacg ctgattgtca gcaaacctga
2161 gcgcaagatg gtcaagggct ccggcttcca cctggacctg ctgctggtag taggcatggg
2221 tggggtggcc gccctctttg ggatgccctg gctcagtgcc accaccgtgc gttccgtcac
2281 ccatgccaac gccctcactg tcatgggcaa agccagcacc ccaggggctg cagcccagat
2341 ccaggaggtc aaagagcagc ggatcagtgg actcctggtc gctgtgcttg tgggcctgtc
2401 catcctcatg gagcccatcc tgtcccgcat ccccctggct gtactgtttg gcatcttcct
2461 ctacatgggg gtcacgtcgc tcagcggcat ccagctcttt gaccgcatct tgcttctgtt
2521 caagccaccc aagtatcacc cagatgtgcc ctacgtcaag cgggtgaaga cctggcgcat
2581 gcacttattc acgggcatcc agatcatctg cctggcagtg ctgtgggtgg tgaagtccac
2641 gccggcctcc ctggccctgc ccttcgtcct catcctcact gtgccgctgc ggcgcgtcct
2701 gctgccgctc atcttcagga acgtggagct tcagtgtctg gatgctgatg atgccaaggc
2761 aacctttgat gaggaggaag gtcgggatga atacgacgaa gtggccatgc ctgtgtgagg
2821 ggcgggccca ggccctagac cctcccccac cattccaca
//