LOCUS BC101570 2869 bp mRNA linear HUM 21-JUL-2006
DEFINITION Homo sapiens solute carrier family 4, anion exchanger, member 1
(erythrocyte membrane protein band 3, Diego blood group), mRNA
(cDNA clone MGC:126619 IMAGE:8069076), complete cds.
ACCESSION BC101570
VERSION BC101570.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2869)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2869)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (12-AUG-2005) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Mike Brownstein, NIMH
cDNA Library Preparation: British Columbia Cancer Research Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRCB Plate: 2 Row: E Column: 10.
FEATURES Location/Qualifiers
source 1..2869
/db_xref="H-InvDB:HIT000336932"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:126619 IMAGE:8069076"
/tissue_type="Brain, cerebellum, PCR rescued clones"
/clone_lib="NIH_MGC_310"
/note="Vector: pCR4-TOPO; Clone identification sequence
tag: AATTTGCC"
gene 1..2869
/gene="SLC4A1"
/gene_synonym="BND3"
/gene_synonym="CD233"
/gene_synonym="EMPB3"
/gene_synonym="FR"
/gene_synonym="RTA1A"
/gene_synonym="SW"
/gene_synonym="WD1"
/gene_synonym="WR"
/db_xref="GeneID:6521"
/db_xref="HGNC:HGNC:11027"
/db_xref="MIM:109270"
CDS 87..2822
/gene="SLC4A1"
/gene_synonym="BND3"
/gene_synonym="CD233"
/gene_synonym="EMPB3"
/gene_synonym="FR"
/gene_synonym="RTA1A"
/gene_synonym="SW"
/gene_synonym="WD1"
/gene_synonym="WR"
/codon_start=1
/product="solute carrier family 4, anion exchanger, member
1 (erythrocyte membrane protein band 3, Diego blood
group)"
/protein_id="AAI01571.1"
/db_xref="GeneID:6521"
/db_xref="HGNC:HGNC:11027"
/db_xref="MIM:109270"
/translation="MEELQDDYEDMMEENLEQEEYEDPDIPESQMEEPAAHDTEATAT
DYHTTSHPGTHKVYVELQELVMDEKNQELRWMEAARWVQLEENLGENGAWGRPHLSHL
TFWSLLELRRVFTKGTVLLDLQETSLAGVANQLLDRFIFEDQIRPQDREELLRALLLK
HSHAGELEALGGVKPAVLTRSGDPSQPLLPQHSSLETQLFCEQGDGGTEGHSPSGILE
KIPPDSEATLVLVGRADFLEQPVLGFVRLQEAAELEAVELPVPIRFLFVLLGPEAPHI
DYTQLGRAAATLMSERVFRIDAYMAQSRGELLHSLEGFLDCSLVLPPTDAPSEQALLS
LVPVQRELLRRRYQSSPAKPDSSFYKGLDLNGGPDDPLQQTGQLFGGLVRDIRRRYPY
YLSDITDAFSPQVLAAVIFIYFAALSPAITFGGLLGEKTRNQMGVSELLISTAVQGIL
FALLGAQPLLVVGFSGPLLVFEEAFFSFCETNGLEYIVGRVWIGFWLILLVVLVVAFE
GSFLVRFISRYTQEIFSFLISLIFIYETFSKLIKIFQDHPLQKTYNYNVLMVPKPQGP
LPNTALLSLVLMAGTFFFAMMLRKFKNSSYFPGKLRRVIGDFGVPISILIMVLVDFFI
QDTYTQKLSVPDGFKVSNSSARGWVIHPLGLRSEFPIWMMFASALPALLVFILIFLES
QITTLIVSKPERKMVKGSGFHLDLLLVVGMGGVAALFGMPWLSATTVRSVTHANALTV
MGKASTPGAAAQIQEVKEQRISGLLVAVLVGLSILMEPILSRIPLAVLFGIFLYMGVT
SLSGIQLFDRILLLFKPPKYHPDVPYVKRVKTWRMHLFTGIQIICLAVLWVVKSTPAS
LALPFVLILTVPLRRVLLPLIFRNVELQCLDADDAKATFDEEEGRDEYDEVAMPV"
BASE COUNT 534 a 901 c 816 g 618 t
ORIGIN
1 cctgaggctc gtgagcaggg acccgcggtg cgggttatgc tgggggctca gatcaccgta
61 gacaactgga cactcaggac cacgccatgg aggagctgca ggatgattat gaagacatga
121 tggaggagaa tctggagcag gaggaatatg aagacccaga catccccgag tcccagatgg
181 aggagccggc agctcacgac accgaggcaa cagccacaga ctaccacacc acatcacacc
241 cgggtaccca caaggtctat gtggagctgc aggagctggt gatggacgaa aagaaccagg
301 agctgagatg gatggaggcg gcgcgctggg tgcaactgga ggagaacctg ggggagaatg
361 gggcctgggg ccgcccgcac ctctctcacc tcaccttctg gagcctccta gagctgcgta
421 gagtcttcac caagggtact gtcctcctag acctgcaaga gacctccctg gctggagtgg
481 ccaaccaact gctagacagg tttatctttg aagaccagat ccggcctcag gaccgagagg
541 agctgctccg ggccctgctg cttaaacaca gccacgctgg agagctggag gccctggggg
601 gtgtgaagcc tgcagtcctg acacgctctg gggatccttc acagcctctg ctcccccaac
661 actcctcact ggagacacag ctcttctgtg agcagggaga tgggggcaca gaagggcact
721 caccatctgg aattctggaa aagattcccc cggattcaga ggccacgttg gtgctagtgg
781 gccgcgccga cttcctggag cagccggtgc tgggcttcgt gaggctgcag gaggcagcgg
841 agctggaggc ggtggagctg ccggtgccta tacgcttcct ctttgtgttg ctgggacctg
901 aggcccccca catcgattac acccagcttg gccgggctgc tgccaccctc atgtcagaga
961 gggtgttccg catagatgcc tacatggctc agagccgagg ggagctgctg cactccctag
1021 agggcttcct ggactgcagc ctagtgctgc ctcccaccga tgccccctcc gagcaggcac
1081 tgctcagtct ggtgcctgtg cagagggagc tacttcgaag gcgctatcag tccagccctg
1141 ccaagccaga ctccagcttc tacaagggcc tagacttaaa tgggggccca gatgaccctc
1201 tgcagcagac aggccagctc ttcgggggcc tggtgcgtga tatccggcgc cgctacccct
1261 attacctgag tgacatcaca gatgcattca gcccccaggt cctggctgcc gtcatcttca
1321 tctactttgc tgcactgtca cccgccatca ccttcggcgg cctcctggga gaaaagaccc
1381 ggaaccagat gggagtgtcg gagctgctga tctccactgc agtgcagggc attctcttcg
1441 ccctgctggg ggctcagccc ctgcttgtgg tcggcttctc aggacccctg ctggtgtttg
1501 aggaagcctt cttctcgttc tgcgagacca acggtctaga gtacatcgtg ggccgcgtgt
1561 ggatcggctt ctggctcatc ctgctggtgg tgttggtggt ggccttcgag ggtagcttcc
1621 tggtccgctt catctcccgc tatacccagg agatcttctc cttcctcatt tccctcatct
1681 tcatctatga gactttctcc aagctgatca agatcttcca ggaccaccca ctacagaaga
1741 cttataacta caacgtgttg atggtgccca aacctcaggg ccccctgccc aacacagccc
1801 tcctctccct tgtgctcatg gccggtacct tcttctttgc catgatgctg cgcaagttca
1861 agaacagctc ctatttccct ggcaagctgc gtcgggtcat cggggacttc ggggtcccca
1921 tctccatcct gatcatggtc ctggtggatt tcttcattca ggatacctac acccagaaac
1981 tctcggtgcc tgatggcttc aaggtgtcca actcctcagc ccggggctgg gtcatccacc
2041 cactgggctt gcgttccgag tttcccatct ggatgatgtt tgcctccgcc ctgcctgctc
2101 tgctggtctt catcctcata ttcctggagt ctcagatcac cacgctgatt gtcagcaaac
2161 ctgagcgcaa gatggtcaag ggctccggct tccacctgga cctgctgctg gtagtaggca
2221 tgggtggggt ggccgccctc tttgggatgc cctggctcag tgccaccacc gtgcgttccg
2281 tcacccatgc caacgccctc actgtcatgg gcaaagccag caccccaggg gctgcagccc
2341 agatccagga ggtcaaagag cagcggatca gtggactcct ggtcgctgtg cttgtgggcc
2401 tgtccatcct catggagccc atcctgtccc gcatccccct ggctgtactg tttggcatct
2461 tcctctacat gggggtcacg tcgctcagcg gcatccagct ctttgaccgc atcttgcttc
2521 tgttcaagcc acccaagtat cacccagatg tgccctacgt caagcgggtg aagacctggc
2581 gcatgcactt attcacgggc atccagatca tctgcctggc agtgctgtgg gtggtgaagt
2641 ccacgccggc ctccctggcc ctgcccttcg tcctcatcct cactgtgccg ctgcggcgcg
2701 tcctgctgcc gctcatcttc aggaacgtgg agcttcagtg tctggatgct gatgatgcca
2761 aggcaacctt tgatgaggag gaaggtcggg atgaatacga cgaagtggcc atgcctgtgt
2821 gaggggcggg cccaggccct agaccctccc ccaccattcc acatcccca
//