LOCUS BC101547 1359 bp mRNA linear HUM 21-JUL-2006
DEFINITION Homo sapiens potassium inwardly-rectifying channel, subfamily J,
member 6, mRNA (cDNA clone MGC:126596 IMAGE:8069053), complete cds.
ACCESSION BC101547
VERSION BC101547.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1359)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1359)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (12-AUG-2005) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Mike Brownstein, NIMH
cDNA Library Preparation: British Columbia Cancer Research Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRCB Plate: 2 Row: D Column: 11.
FEATURES Location/Qualifiers
source 1..1359
/db_xref="H-InvDB:HIT000336912"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:126596 IMAGE:8069053"
/tissue_type="Placenta, PCR rescued clones"
/clone_lib="NIH_MGC_303"
/note="Vector: pCR4-TOPO with reversed insert; Clone
identification sequence tag: CAGGCCGG"
gene 1..1359
/gene="KCNJ6"
/gene_synonym="BIR1"
/gene_synonym="GIRK2"
/gene_synonym="hiGIRK2"
/gene_synonym="KATP2"
/gene_synonym="KIR3.2"
/db_xref="GeneID:3763"
/db_xref="HGNC:HGNC:6267"
/db_xref="MIM:600877"
CDS 56..1327
/gene="KCNJ6"
/gene_synonym="BIR1"
/gene_synonym="GIRK2"
/gene_synonym="hiGIRK2"
/gene_synonym="KATP2"
/gene_synonym="KIR3.2"
/codon_start=1
/product="potassium inwardly-rectifying channel, subfamily
J, member 6"
/protein_id="AAI01548.1"
/db_xref="GeneID:3763"
/db_xref="HGNC:HGNC:6267"
/db_xref="MIM:600877"
/translation="MAKLTESMTNVLEGDSMDQDVESPVAIHQPKLPKQARDDLPRHI
SRDRTKRKIQRYVRKDGKCNVHHGNVRETYRYLTDIFTTLVDLKWRFNLLIFVMVYTV
TWLFFGMIWWLIAYIRGDMDHIEDPSWTPCVTNLNGFVSAFLFSIETETTIGYGYRVI
TDKCPEGIILLLIQSVLGSIVNAFMVGCMFVKISQPKKRAETLVFSTHAVISMRDGKL
CLMFRVGDLRNSHIVEASIRAKLIKSKQTSEGEFIPLNQTDINVGYYTGDDRLFLVSP
LIISHEINQQSPFWEISKAQLPKEELEIVVILEGMVEATGMTCQARSSYITSEILWGY
RFTPVLTLEDGFYEVDYNSFHETYETSTPSLSAKELAELASRAELPLSWSVSSKLNQH
AELETEEEEKNLEEQTERNGDVANLENESKV"
BASE COUNT 381 a 337 c 346 g 295 t
ORIGIN
1 tgagtgaagc caccccgtcc gcagccagga aaagcacaaa gaagaaactg caacaatggc
61 caagctgaca gaatccatga ctaacgtcct ggagggcgac tccatggatc aggacgtcga
121 aagcccagtg gccattcacc agccaaagtt gcctaagcag gccagggatg acctgccaag
181 acacatcagc cgagatcgga ccaaaaggaa aatccagagg tacgtgagga aagacggaaa
241 gtgcaatgtt catcacggca acgtgaggga gacctatcgc tacctgaccg atatcttcac
301 cacattagtg gacctgaagt ggagattcaa cctattgatt tttgtcatgg tttacacagt
361 gacctggctc ttttttggaa tgatctggtg gttgatcgca tacatacggg gagacatgga
421 ccacatagag gacccctcct ggactccttg tgttaccaac ctcaacgggt tcgtctctgc
481 ttttttattc tcaatagaga cagaaaccac cattggttat ggctaccggg tcatcacaga
541 taaatgcccg gagggaatta ttcttctctt aatccaatct gtgttggggt ccattgtcaa
601 tgcattcatg gtgggatgca tgtttgtaaa aatctctcaa cccaagaaga gggcagagac
661 cctggtcttt tccacccatg cagtgatctc catgcgggat gggaaactgt gcctgatgtt
721 ccgggtaggg gaccttagga attcccacat tgtggaggct tccatcagag ccaagttgat
781 caaatccaaa cagacctcgg agggggagtt catcccgttg aaccagacgg atatcaacgt
841 agggtattac acgggggatg accgtctgtt tctggtgtca ccgctgatca ttagccatga
901 aattaaccaa cagagtcctt tctgggagat ctccaaagcc cagctgccca aagaggaact
961 ggaaattgtg gtcatcctag aaggaatggt ggaagccaca gggatgacat gccaagctcg
1021 aagctcctac atcaccagtg agatcctgtg gggttaccgg ttcacacctg tcctgaccct
1081 ggaggacggg ttctacgaag ttgactacaa cagcttccat gagacctatg agaccagcac
1141 cccatccctt agtgccaaag agctggccga gttagccagc agggcagagc tgcccctgag
1201 ttggtctgta tccagcaaac tcaaccaaca tgcagaactg gagactgaag aggaagaaaa
1261 gaacctcgaa gagcaaacag aaagaaatgg tgatgtggca aacctggaga atgaatccaa
1321 agtttagtgc cctagctggg caaacccttc tcttctccc
//