LOCUS BC101528 1918 bp mRNA linear HUM 03-NOV-2005 DEFINITION Homo sapiens phosphatase and actin regulator 1, mRNA (cDNA clone MGC:126577 IMAGE:8069034), complete cds. ACCESSION BC101528 VERSION BC101528.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1918) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1918) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (12-AUG-2005) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Mike Brownstein, NIMH cDNA Library Preparation: British Columbia Cancer Research Center cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRCB Plate: 2 Row: C Column: 16. FEATURES Location/Qualifiers source 1..1918 /db_xref="H-InvDB:HIT000336893" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:126577 IMAGE:8069034" /tissue_type="Brain, cerebellum, PCR rescued clones" /clone_lib="NIH_MGC_311" /note="Vector: pCR4-TOPO with reversed insert; Clone identification sequence tag: GGTGGGGA" gene 1..1918 /gene="PHACTR1" /gene_synonym="dJ257A7.2" /gene_synonym="KIAA1733" /gene_synonym="RPEL" /db_xref="GeneID:221692" /db_xref="HGNC:HGNC:20990" /db_xref="IMGT/GENE-DB:20990" /db_xref="MIM:608723" CDS 97..1839 /gene="PHACTR1" /gene_synonym="dJ257A7.2" /gene_synonym="KIAA1733" /gene_synonym="RPEL" /codon_start=1 /product="phosphatase and actin regulator 1" /protein_id="AAI01529.1" /db_xref="GeneID:221692" /db_xref="HGNC:HGNC:20990" /db_xref="IMGT/GENE-DB:20990" /db_xref="MIM:608723" /translation="MDYPKMDYFLDVESAHRLLDVESAQRFFYSQGAQARRATLLLPP TLMAASSEDDIDRRPIRRVRSKSDTPYLAEARISFNLGAAEEVERLAAMRSDSLVPGT HTPPIRRRSKFANLGRIFKPWKWRKKKSEKFKHTSAALERKISMRQSREELIKRGVLK EIYDKDGELSISNEEDSLENGQSLSSSQLSLPALSEMEPVPMPRDPCSYEVLQPSDIM DGPDPGAPVKLPCLPVKLSPPLPPKKVMICMPVGGPDLSLVSYTAQKSGQQGVAQHHH TVLPSQIQHQLQYGSHGQHLPSTTGSLPMHPSGCRMIDELNKTLAMTMQRLESSEQRV PCSTSYHSSGLHSGDGVTKAGPMGLPEIRQVPTVVIECDDNKENVPHESDYEDSSCLY TREEEEEEEDEDDDSSLYTSSLAMKVCRKDSLAIKLSNRPSKRELEEKNILPRQTDEE RLELRQQIGTKLTRRLSQRPTAEELEQRNILKPRNEQEEQEEKREIKRRLTRKLSQRP TVEELRERKILIRFSDYVEVADAQDYDRRADKPWTRLTAADKAAIRKELNEFKSTEME VHELSRHLTRFHRP" BASE COUNT 529 a 508 c 504 g 377 t ORIGIN 1 cggctcttgt tttaccgctg acagatagcc tttgattttt attttttgca gtgttccagt 61 gttttctctc aaaactctgt gtttggaaca tcaaggatgg attatcccaa aatggattat 121 tttctggatg tagagtctgc tcacagactc ttggatgttg agtcagctca aagattcttc 181 tacagtcaag gagctcaagc tcgccgggcg accctgctcc tgcctcccac attaatggcg 241 gcatcctcgg aggatgatat agaccggcgg cccatccgga gagtgcgctc caagagcgac 301 acgccgtacc tcgcagaggc caggatctcc tttaacctgg gggcagctga ggaagtggag 361 aggctggcgg cgatgcgttc tgactccctc gtcccaggca cccacacccc acccatccgc 421 aggagaagta agtttgccaa cctgggaagg attttcaagc cttggaaatg gaggaagaag 481 aaaagcgaaa agttcaaaca cacgtcagca gccctggaaa ggaaaatatc tatgaggcaa 541 agcagagaag agctgataaa gcgaggagtc ctgaaggaaa tctatgataa agatggggaa 601 ctctctatat ccaatgaaga ggactcccta gaaaatgggc agtccctgag ctccagccag 661 ctgtctctgc ctgccctgtc cgaaatggag ccagtcccaa tgcccaggga tccctgctca 721 tatgaggtgc tccaaccgtc agacatcatg gatgggccag atcctggcgc ccctgtgaaa 781 ttgccttgtc tgccagtgaa actgtcgcct ccgctacctc caaagaaagt catgatctgt 841 atgcccgtgg gggggccaga cctctcactg gtgtcctaca cagcccagaa gagtggccag 901 cagggtgtgg cccagcacca ccacactgtc ctgccctccc agatccagca ccagctgcag 961 tacggcagcc acggccagca cctcccctcc accaccggct ccctccccat gcacccctcg 1021 ggctgcagaa tgatagacga gctcaacaaa acgctggcca tgaccatgca gaggctggaa 1081 agctctgagc agcgggtccc ctgttccact tcttaccaca gctctgggtt gcactcgggt 1141 gatggggtca ccaaagcagg acctatgggc cttccagaaa taagacaagt gccaactgtt 1201 gtgattgaat gtgatgacaa taaagaaaat gtgcctcatg agtcagacta cgaagactct 1261 tcttgcctgt atacaagaga agaggaggaa gaggaggagg acgaagacga cgacagctca 1321 ttatacacca gctccctggc catgaaggtc tgcaggaagg actccttagc catcaaactc 1381 agcaacaggc cctccaagcg agagctggaa gaaaagaaca tccttcccag gcagacggat 1441 gaggagcggc tggagctgag gcaacagatt ggcaccaagc tcaccaggcg gctgagccag 1501 aggccaactg cagaggaact ggaacagagg aacattttga aacctcggaa tgaacaagag 1561 gaacaggagg agaagagaga gatcaagagg aggctaaccc gaaagctcag tcaaaggccc 1621 acggtggaag agcttcggga aagaaagatc ctcatccgct tcagtgacta cgtggaggtg 1681 gctgacgctc aggactatga ccgcagggca gataagccgt ggacccgcct caccgctgca 1741 gacaaagctg ccatccgaaa ggagctcaat gaattcaaaa gcactgagat ggaagttcat 1801 gaattgagta gacacttaac aaggtttcac cgaccttaac agtcgaattc ctcttgagtg 1861 ctatgctgtc ttcaaaacat aaatttataa gaaccataag tgctggtatt tattcact //