LOCUS BC101505 731 bp mRNA linear HUM 17-JUL-2006 DEFINITION Homo sapiens claudin 17, mRNA (cDNA clone MGC:126554 IMAGE:8069011), complete cds. ACCESSION BC101505 VERSION BC101505.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 731) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 731) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (12-AUG-2005) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Mike Brownstein, NIMH cDNA Library Preparation: British Columbia Cancer Research Center cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRCB Plate: 2 Row: B Column: 17. FEATURES Location/Qualifiers source 1..731 /db_xref="H-InvDB:HIT000336871" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:126554 IMAGE:8069011" /tissue_type="Brain, cerebellum, PCR rescued clones" /clone_lib="NIH_MGC_311" /note="Vector: pCR4-TOPO with reversed insert; Clone identification sequence tag: CCCCTTCG" gene 1..731 /gene="CLDN17" /db_xref="GeneID:26285" /db_xref="HGNC:HGNC:2038" CDS 37..711 /gene="CLDN17" /codon_start=1 /product="claudin 17" /protein_id="AAI01506.1" /db_xref="GeneID:26285" /db_xref="HGNC:HGNC:2038" /translation="MAFYPLQIAGLVLGFLGMVGTLATTLLPQWRVSAFVGSNIIVFE RLWEGLWMNCIRQARVRLQCKFYSSLLALPPALETARALMCVAVALSLIALLIGICGM KQVQCTGSNERAKAYLLGTSGVLFILTGIFVLIPVSWTANIIIRDFYNPAIHIGQKRE LGAALFLGWASAAVLFIGGGLLCGFCCCNRKKQGYRYPVPGYRVPHTDKRRNTTMLSK TSTSYV" BASE COUNT 161 a 189 c 188 g 193 t ORIGIN 1 ccactccgaa ttgaaccagt cttcaaagta aaggcaatgg cattttatcc cttgcaaatt 61 gctgggctgg ttcttgggtt ccttggcatg gtggggactc ttgccacaac ccttctgcct 121 cagtggagag tatcagcttt tgttggcagc aacattattg tctttgagag gctctgggaa 181 gggctctgga tgaattgcat ccgacaagcc agggtccggt tgcaatgcaa gttctatagc 241 tccttgttgg ctctcccgcc tgccctggaa acagcccggg ccctcatgtg tgtggctgtt 301 gctctctcct tgatcgccct gcttattggc atctgtggca tgaagcaggt ccagtgcaca 361 ggctctaacg agagggccaa agcatacctt ctgggaactt caggagtcct cttcatcctg 421 acgggcatct tcgttctgat tccggtgagc tggacagcca atataatcat cagagatttc 481 tacaacccag ccatccacat aggtcagaaa cgagagctgg gagcagcact tttccttggc 541 tgggcaagcg ctgctgtcct cttcattgga gggggtctgc tttgtggatt ttgctgctgc 601 aacagaaaga agcaagggta cagatatcca gtgcctggct accgtgtgcc acacacagat 661 aagcgaagaa atacgacaat gcttagtaag acctccacca gttatgtcta atgcctcctt 721 ttggctccaa g //