LOCUS BC101496 2640 bp mRNA linear HUM 09-DEC-2005
DEFINITION Homo sapiens ATPase type 13A4, mRNA (cDNA clone MGC:126545
IMAGE:8069002), complete cds.
ACCESSION BC101496
VERSION BC101496.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2640)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2640)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (12-AUG-2005) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Mike Brownstein, NIMH
cDNA Library Preparation: British Columbia Cancer Research Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRCB Plate: 2 Row: B Column: 8.
FEATURES Location/Qualifiers
source 1..2640
/db_xref="H-InvDB:HIT000336864"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:126545 IMAGE:8069002"
/tissue_type="Brain, cerebral cortex and lung, PCR rescued
clones"
/clone_lib="NIH_MGC_323"
/note="Vector: pCR4-TOPO with reversed insert; Clone
identification sequence tag: TAGGACGC"
gene 1..2640
/gene="ATP13A4"
/gene_synonym="DKFZp761I1011"
/db_xref="GeneID:84239"
/db_xref="HGNC:HGNC:25422"
/db_xref="IMGT/GENE-DB:25422"
/db_xref="MIM:609556"
CDS 95..2617
/gene="ATP13A4"
/gene_synonym="DKFZp761I1011"
/codon_start=1
/product="ATP13A4 protein"
/protein_id="AAI01497.1"
/db_xref="GeneID:84239"
/db_xref="HGNC:HGNC:25422"
/db_xref="IMGT/GENE-DB:25422"
/db_xref="MIM:609556"
/translation="MGHFEKGQHALLNEGEENEMEIFGYRTQGCRKSLCLAGSIFSFG
ILPLVFYWRPAWHVWAHCVPCSLQEADTVLLRTTDEFQIYSWKKVIWIYLSALNSAFG
LTPDHPLMTDEEYIINRAIRKPDLKVRCIKVQKIRYVWNYLEGQFQKIGSLEDWLSSA
KIHQKFGSGLTREEQEIRRLICGPNTIDVEVTPIWKLLIKEVLNPFYIFQLFSVCLWF
SEDYKEYAFAIIIMSIISISLTVYDLREQSVKLHHLVESHNSITVSVCGRKAGVQELE
SRVLVPGDLLILTGNKVLMPCDAVLIEGSCVVDEGMLTGESIPVTKTPLPKMDSSVPW
KTQSEADYKRHVLFCGTEVIQAKAACSGTVRAVVLQTGFNTAKGDLVRSILYPKPVNF
QLYRDAIRFLLCLVGTATIGMIYTLCVYVLSGEPPEEVVRKALDVITIAVPPALPAAL
TTGIIYAQRRLKKRGIFCISPQRINVCGQLNLVCFDKTGTLTRDGLDLWGVVSCDRNG
FQEVHSFASGQALPWGPLCAAMASCHSLILLDGTIQGDPLDLKMFEATTWEMAFSGDD
FHIKGVPAHAMVVKPCRTASQVPVEGIAILHQFPFSSALQRMTVIVQEMGGDRLAFMK
GAPERVASFCQPETVPTSFVSELQIYTTQGFRVIALAYKKLENDHHATTLTRETVESD
LIFLGLLILENRLKEETKPVLEELISARIRTVMITGDNLQTAITVARKSGMVSESQKV
ILIEANETTGSSSASISWTLVEEKKHIMYGNQDNYINIRDEVSDKGREGSYHFALTGK
SFHVISQHFSSLLPKILINGTIFARMSPGQKSSLVEEFQKLE"
BASE COUNT 734 a 570 c 676 g 660 t
ORIGIN
1 tcagctgagg agctgcggtg gctcggcgag ttggagttca tcctggaagc gtctgcacga
61 caaggtcagg gaggaggtgt ggaataactt tttcatggga cactttgaga agggccagca
121 cgctctgctc aatgaaggag aagagaatga gatggagata tttggctatc ggactcaagg
181 ctgccggaaa agtctctgcc ttgccggatc catcttctca tttggaatcc tccccttggt
241 gttttactgg agaccagcat ggcacgtatg ggcacattgt gtcccatgtt ccttgcaaga
301 agcagacact gtgttgctga ggacaacgga tgaattccaa atttactctt ggaaaaaggt
361 aatatggatc tacctgtcag cattaaacag cgcatttggt ctcactcctg accaccctct
421 catgacagat gaggagtata tcataaatag agccataaga aagccagacc taaaggtgag
481 atgcatcaaa gtgcagaaaa taagatatgt ttggaactac ttagaaggac agttccagaa
541 aattggttct ttggaagact ggcttagttc tgccaagata catcaaaaat ttggatcagg
601 cttgacaaga gaagaacagg agattaggag gttaatatgt gggcctaata ctatcgatgt
661 tgaagttaca ccaatttgga aactgctcat caaggaggtt ctaaatccat tttatatatt
721 tcaactcttc agtgtctgtt tgtggtttag tgaagactat aaggaatatg cttttgccat
781 cataatcatg tccataattt ccatatcttt gacagtatat gatctcagag agcaatctgt
841 aaaactccac catctcgtcg agtcacataa tagcattacg gtctctgtat gtgggagaaa
901 agctggagtt caagagctgg aatcacgcgt cctggtgcct ggagatttat taattttgac
961 agggaacaaa gtgctaatgc catgtgatgc cgttctgatt gaaggcagct gtgtggtgga
1021 tgaaggcatg ctgacaggag aaagtattcc agtcaccaaa actccgttac ccaagatgga
1081 tagctctgtg ccctggaaaa cacagagtga agcggattac aagcggcatg tcctcttctg
1141 tggaacagag gttatccagg ccaaggcagc ttgctctggg accgtgagag ccgtggtact
1201 gcagactgga ttcaacactg caaagggaga ccttgtgaga tccattctct accctaagcc
1261 agtgaatttt cagttgtaca gggatgccat caggttcctc ctgtgccttg taggaacagc
1321 caccattggg atgatctata ctctgtgtgt ctatgtgctt agtggggaac ctccagagga
1381 ggtggtgagg aaagcccttg acgtcatcac aattgcggtt cctccggctc tacctgctgc
1441 tctgaccaca ggcattatct atgcccagag gaggctgaag aagagaggca tcttctgcat
1501 tagcccccag aggatcaacg tatgtggaca gttaaacctt gtctgctttg acaagacagg
1561 caccttaaca agggacggct tggacctctg gggagtcgtg tcctgtgata ggaatggctt
1621 tcaggaagtt cacagctttg cctcaggcca ggctttgcca tggggcccac tgtgtgcagc
1681 gatggccagc tgccactctc tgatccttct tgatgggacc atccagggag accctctgga
1741 cctcaaaatg tttgaagcca ccacctggga aatggctttt tctggggacg atttccacat
1801 caagggagtg ccggcacatg ccatggtagt taagccctgc agaacagcca gccaggtccc
1861 agtggaagga attgcaatcc tgcatcagtt cccattctca tcggcactgc aaagaatgac
1921 agtcattgtc caagagatgg gaggtgaccg actggcattc atgaaaggtg caccagagag
1981 ggtggccagc ttttgccaac ctgagacagt acccactagt tttgttagcg aacttcagat
2041 ttacacgaca cagggcttcc gagtcatagc actggcctac aagaagctgg aaaatgacca
2101 tcacgctact accttgacga gggagacggt agaatcagac ctgatatttc tggggctgct
2161 gatcttggag aatcgattga aggaagagac aaaacctgtc ttggaagagc tcatctcagc
2221 ccggataagg actgtaatga tcacaggtga caatcttcag actgcaataa cagtggccag
2281 aaaatctgga atggtttctg aaagccagaa agtcattctc attgaggcaa atgaaaccac
2341 cgggtcctca tcagcatcta tatcttggac gttagtagaa gagaagaaac acattatgta
2401 tgggaatcag gacaattaca ttaacatcag ggatgaagtc tctgataaag gcagagaagg
2461 aagttaccat tttgccctaa ctggaaaatc ctttcatgtt ataagtcaac atttcagcag
2521 cctactgcca aagatattga tcaatgggac catctttgca agaatgtctc ctgggcagaa
2581 gtccagtctg gtggaagaat ttcagaaact ggagtaggtt ctttgccagt gcaggtggca
//