LOCUS BC101478 2917 bp mRNA linear HUM 09-DEC-2005
DEFINITION Homo sapiens zinc finger, CCHC domain containing 14, mRNA (cDNA
clone MGC:126527 IMAGE:8068984), complete cds.
ACCESSION BC101478
VERSION BC101478.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2917)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2917)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (12-AUG-2005) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Mike Brownstein, NIMH
cDNA Library Preparation: British Columbia Cancer Research Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRCB Plate: 2 Row: A Column: 14.
FEATURES Location/Qualifiers
source 1..2917
/db_xref="H-InvDB:HIT000336848"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:126527 IMAGE:8068984"
/tissue_type="Brain, cerebellum, PCR rescued clones"
/clone_lib="NIH_MGC_310"
/note="Vector: pCR4-TOPO; Clone identification sequence
tag: CCACTGAT"
gene 1..2917
/gene="ZCCHC14"
/gene_synonym="BDG-29"
/gene_synonym="BDG29"
/gene_synonym="MGC14139"
/db_xref="GeneID:23174"
/db_xref="HGNC:HGNC:24134"
/db_xref="IMGT/GENE-DB:24134"
/db_xref="MIM:24134"
CDS 35..2884
/gene="ZCCHC14"
/gene_synonym="BDG-29"
/gene_synonym="BDG29"
/gene_synonym="MGC14139"
/codon_start=1
/product="zinc finger, CCHC domain containing 14"
/protein_id="AAI01479.1"
/db_xref="GeneID:23174"
/db_xref="HGNC:HGNC:24134"
/db_xref="IMGT/GENE-DB:24134"
/db_xref="MIM:24134"
/translation="MASNHPAFSFHQKQVLRQELTQIQSSLNGGGGHGGKGAPGPGGA
LPTCPACHKITPRTEAPVSSVSNSLENALHTSAHSTEESLPKRPLGKHSKVSVEKIDL
KGLSHTKNDRNVECSFEVLWSDSSITSVTKSSSEVTEFISKLCQLYPEENLEKLIPCL
AGPDAFYVERNHVDLDSGLRYLASLPSHVLKNDHVRRFLSTSSPPQQLQSPSPGNPSL
SKVGTVMGVSGRPVCGVAGIPSSQSGAQHHGQHPAGSAAPLPHCSHAGSAGSALAYRT
QMDTSPAILMPSSLQTPQTQEQNGILDWLRKLRLHKYYPVFKQLSMEKFLSLTEEDLN
KFESLTMGAKKKLKTQLELEKEKSERRCLNPSAPPLVTSSGVARVPPTSHVGPVQSGR
GSHAAELRVEVEQPHHQLPREGSSSEYSSSSSSPMGVQAREESSDSAEENDRRVEIHL
ESSDKEKPVMLLNHFTSSSARPTAQVLPVQNEASSNPSGHHPLPPQMLSAASHITPIR
MLNSVHKPERGSADMKLLSSSVHSLLSLEERNKGSGPRSSMKVDKSFGSAMMDVLPAS
APHQPVQVLSGLSESSSMSPTVSFGPRTKVVHASTLDRVLKTAQQPALVVETSTAATG
TPSTVLHAARPPIKLLLSSSVPADSAISGQTSCPNNVQISVPPAIINPRTALYTANTK
VAFSAMSSMPMGPLQGGFCANSNTASPSSHPSTSFANMATLPSCPAPSSSPALSSVPE
SSFYSSSGGGGSTGNIPASNPNHHHHHHHQQPPAPPQPAPPPPGCIVCTSCGCSGSCG
SSGLTVSYANYFQHPFSGPSVFTFPFLPFSPMCSSGYVSAQQYGGGSTFPVVHAPYSS
SGTPDPVLSGQSTFAVPPMQNFMAGTAGVYQTQGLVGSSNGSSHKKSGNLSCYNCGAT
GHRAQDCKQPSMDFNRPGTFRLKYAPPAESLDSTD"
BASE COUNT 643 a 950 c 763 g 561 t
ORIGIN
1 ggcacgaggc gatgagttcc tgctgctgtt caccatggcc tccaaccacc cggccttcag
61 cttccaccag aagcaggtgc tgcgccagga gctcacgcag atccagagca gcctgaacgg
121 cggcgggggc cacggcggca agggcgcgcc cgggccgggc ggcgcgctgc ccacttgccc
181 agcctgccac aagatcactc caagaactga ggcccctgtc agcagtgtca gtaatagttt
241 ggagaatgcc ctgcacacat cagcacattc cacggaggag tcgctgccca agaggccctt
301 aggaaaacac agcaaagtga gtgttgaaaa gatagacctg aagggattat cacacacaaa
361 aaatgacaga aatgttgaat gttcctttga ggtcttgtgg tctgattctt caataacatc
421 agtaaccaaa tcttcctctg aagtgacgga atttatttca aagctatgtc agctctatcc
481 tgaagagaac ttggagaaac tcattccttg cttagctggt ccggacgcat tttatgtgga
541 gcgaaaccac gtggatctgg actcaggcct gaggtacctg gcctcattac cttctcacgt
601 gttgaaaaat gaccatgtca ggaggtttct cagcacttcc tctcccccac agcagcttca
661 gagtccaagt cctggcaatc cctccctttc taaagtaggt accgtgatgg gcgtgtctgg
721 aaggcctgtg tgtggagtgg ctggtatccc gtcctcgcag agcggagccc agcaccacgg
781 gcagcacccg gccggctccg ccgccccctt gcctcactgc tcccatgcgg gcagcgcggg
841 ctcagccctg gcctaccgga cccagatgga cacatcacct gccatcctca tgccttccag
901 tctgcagacc cctcagaccc aggagcagaa tgggattcta gactggctta ggaaactgcg
961 tttgcacaag tattaccccg tctttaagca gctctccatg gagaagtttt tgagccttac
1021 tgaagaagat ctgaataaat ttgagtctct taccatgggg gcaaagaaga agctcaagac
1081 ccagctggag ctggaaaagg agaagtcaga gagacggtgc ctgaacccct cggccccgcc
1141 gctggtcacc agcagtggtg tggctcgagt gccccccacc agccacgtcg ggcccgtgca
1201 gtcggggcgg ggcagccatg cagcagagct gcgggtggaa gtggagcagc cccatcacca
1261 gctgccccgg gaaggcagtt cctcggagta ctccagctcc tcctccagcc ccatgggggt
1321 acaggcccgg gaagagagct ccgacagcgc tgaggagaat gacagacgtg tggagattca
1381 cttggagagc tctgacaagg agaagccggt gatgctgctg aatcacttca cttccagttc
1441 cgccagaccc acggcccagg ttctccctgt gcagaatgag gccagctcca atccatcagg
1501 ccaccacccc ctgcccccgc agatgctgag cgcagcctca cacatcacac ccatccgcat
1561 gctgaattcc gtgcacaagc cggaaagagg gagcgcggac atgaagctcc tctcgtcttc
1621 tgtgcactca cttttgtctc tagaagaaag gaataaagga tctggaccaa gaagcagcat
1681 gaaagtggac aagagctttg gcagcgccat gatggacgtg ctgcccgcgt ccgcacccca
1741 ccagcctgtg caggtcctct ctgggctttc ggagagcagc tccatgtcac ccacagtctc
1801 ctttggtccc cggaccaaag tcgtgcatgc atccacgctg gacagggtgc tgaagacagc
1861 acagcaaccg gccctggtcg tggagaccag cacggctgcc acggggacgc ccagcacagt
1921 cctccacgcc gcccgtccgc ccatcaaact gctgctgtcg tcatctgttc ctgctgattc
1981 tgccatttct gggcaaactt cctgtcctaa taatgtgcaa ataagtgtgc cccctgcaat
2041 aataaacccc cggactgctc tgtacacagc caacaccaaa gttgcctttt ctgcaatgag
2101 cagtatgcca atgggccccc tgcagggtgg cttctgtgca aacagcaaca ctgcctctcc
2161 cagcagccac ccctccacgt cctttgccaa catggccacg ttgcccagct gcccagcccc
2221 cagctccagc ccggcgctgt cctccgtccc tgaaagcagt ttctatagca gcagtggcgg
2281 tggcggctcc acaggaaaca ttcctgcctc gaatccgaac caccaccacc accaccacca
2341 tcagcagccc ccggcacccc cgcagcccgc cccacccccg ccaggctgca ttgtgtgcac
2401 gtcctgtggc tgcagcggca gctgcggctc gagtggcctg actgtcagct acgccaacta
2461 cttccagcac ccgttctccg gtccgtccgt gttcaccttc cccttcttgc ccttcagtcc
2521 catgtgcagc agcggctacg tcagcgccca gcagtacggc ggcggctcca ccttccccgt
2581 cgtgcacgcc ccttacagca gcagcgggac cccagaccct gtcctgagtg ggcagtccac
2641 gtttgccgtg ccacccatgc agaacttcat ggcagggaca gcaggggtgt accagaccca
2701 aggactggtg ggcagtagca atggttccag tcacaaaaag agcgggaacc tatcttgtta
2761 caactgcggg gccactggtc accgcgccca ggactgcaaa cagccgtcca tggacttcaa
2821 ccggccaggt acttttaggt tgaaatacgc ccctccagca gaaagtctgg actccacaga
2881 ttgatatttt tctctggcaa cagaacgtta ttaagcc
//