LOCUS BC101477 1721 bp mRNA linear HUM 07-AUG-2007
DEFINITION Homo sapiens eukaryotic translation initiation factor 3, subunit D,
mRNA (cDNA clone MGC:126526 IMAGE:8068983), complete cds.
ACCESSION BC101477
VERSION BC101477.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1721)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1721)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (12-AUG-2005) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Mike Brownstein, NIMH
cDNA Library Preparation: British Columbia Cancer Research Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRCB Plate: 2 Row: A Column: 13.
FEATURES Location/Qualifiers
source 1..1721
/db_xref="H-InvDB:HIT000336847"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:126526 IMAGE:8068983"
/tissue_type="Brain, cerebral cortex, PCR rescued clones"
/clone_lib="NIH_MGC_287"
/note="Vector: pCR4-TOPO with reversed insert; Clone
identification sequence tag: GCCCAACG"
gene 1..1721
/gene="EIF3D"
/gene_synonym="eIF3-p66"
/gene_synonym="eIF3-zeta"
/db_xref="GeneID:8664"
/db_xref="HGNC:HGNC:3278"
/db_xref="MIM:603915"
CDS 28..1674
/gene="EIF3D"
/gene_synonym="eIF3-p66"
/gene_synonym="eIF3-zeta"
/codon_start=1
/product="eukaryotic translation initiation factor 3,
subunit D"
/protein_id="AAI01478.1"
/db_xref="GeneID:8664"
/db_xref="HGNC:HGNC:3278"
/db_xref="MIM:603915"
/translation="MAKFMTPVIQDNPSGWGPCAVPEQFRDMPYQPFSKGDRLGKVAD
WTGATYQDKRYTNKYSSQFGGGSQYAYFHEEDESSFQLVDTARTQKTAYQRNRMRFAQ
RNLRRDKDRRNMLQFNLQILPKSAKQKERERIRLQKKFQKQFGVRQKWDQKSQKPRDS
SVEVRSDWEVKEEMDFPQLMKMRYLEVSEPQDIECCGALEYYDKAFDRITTRSEKPLR
SIKRIFHTVTTTDDPVIRKLAKTQGNVFATDAILATLMSCTRSVYSWDIVVQRVGSKL
FFDKRDNSDFDLLTVSETANEPPQDEGNSFNSPRNLAMEATYINHNFSQQCLRMGKER
YNFPNPNPFVEDDMDKNEIASVAYRYRRWKLGDDIDLIVRCEHDGVMTGANGEVSFIN
IKTLNEWDSRHCNGVDWRQKLDSQRGAVIATELKNNSYKLARWTCCALLAGSEYLKLG
YVSRYHVKDSSRHVILGTQQFKPNEFASQINLSVENAWGILRCVIDICMKLEEGKYLI
LKDPNKQVIRVYSLPDGTFSSDEDEEEEEEEEEEEEEEET"
BASE COUNT 478 a 417 c 466 g 360 t
ORIGIN
1 ggccgaggcc attgcagatt ttggaagatg gcaaagttca tgacacccgt gatccaggac
61 aacccctcag gctggggtcc ctgtgcggtt cccgagcagt ttcgggatat gccctaccag
121 ccgttcagca aaggagatcg gctaggaaag gttgcagact ggacaggagc cacataccaa
181 gataagaggt acacaaataa gtactcctct cagtttggtg gtggaagtca atatgcttat
241 ttccatgagg aggatgaaag tagcttccag ctggtggata cagcgcgcac acagaagacg
301 gcctaccagc ggaatcgaat gagatttgcc cagaggaacc tccgcagaga caaagatcgt
361 cggaacatgt tgcagttcaa cctgcagatc ctgcctaaga gtgccaaaca gaaagagaga
421 gaacgcattc gactgcagaa aaagttccag aaacaatttg gggttaggca gaaatgggat
481 cagaaatcac agaaaccccg agactcttca gttgaagttc gtagtgattg ggaagtgaaa
541 gaggaaatgg attttcctca gttgatgaag atgcgctact tggaagtatc agagccacag
601 gacattgagt gttgtggggc cctagaatac tacgacaaag cctttgaccg catcaccacg
661 aggagtgaga agccactgcg gagcatcaag cgcatcttcc acactgtcac caccacagac
721 gaccctgtca tccgcaagct ggcaaaaact caggggaatg tgtttgccac tgatgccatc
781 ctggccacgc tgatgagctg tacccgctca gtgtattcct gggatattgt cgtccagaga
841 gttgggtcca aactcttctt tgacaagaga gacaactctg actttgacct cctgacagtg
901 agtgagactg ccaatgagcc ccctcaagat gaaggtaatt ccttcaattc accccgcaac
961 ctggccatgg aggcaaccta catcaaccac aatttctccc agcagtgctt gagaatgggg
1021 aaggaaagat acaacttccc caacccaaac ccgtttgtgg aggacgacat ggataagaat
1081 gaaatcgcct ctgttgcgta ccgttaccgc aggtggaagc ttggagatga tattgacctt
1141 attgtccgtt gtgagcacga tggcgtcatg actggagcca acggggaagt gtccttcatc
1201 aacatcaaga cactcaatga gtgggattcc aggcactgta atggcgttga ctggcgtcag
1261 aagctggact ctcagcgagg ggctgtcatt gccacggagc tgaagaacaa cagctacaag
1321 ttggcccggt ggacctgctg tgctttgctg gctggatctg agtacctcaa gcttggttat
1381 gtgtctcggt accacgtgaa agactcctca cgccacgtca tcctaggcac ccagcagttc
1441 aagcctaatg agtttgccag ccagatcaac ctgagcgtgg agaatgcctg gggcatttta
1501 cgctgcgtca ttgacatctg catgaagctg gaggagggca aatacctcat cctcaaggac
1561 cccaacaagc aggtcatccg tgtctacagc ctccctgatg gcaccttcag ctctgatgaa
1621 gatgaggagg aagaggagga ggaagaagag gaagaagaag aggaagaaac ttaaaccagt
1681 gatgtggagc tggagtttgt ccttccaccg agactacgag g
//