LOCUS BC101472 3866 bp mRNA linear HUM 17-JUL-2006 DEFINITION Homo sapiens BRCA1 interacting protein C-terminal helicase 1, mRNA (cDNA clone MGC:126521 IMAGE:8068978), complete cds. ACCESSION BC101472 VERSION BC101472.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 3866) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 3866) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (12-AUG-2005) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Mike Brownstein, NIMH cDNA Library Preparation: British Columbia Cancer Research Center cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRCB Plate: 2 Row: A Column: 8. FEATURES Location/Qualifiers source 1..3866 /db_xref="H-InvDB:HIT000336842" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:126521 IMAGE:8068978" /tissue_type="Lung and heart, PCR rescued clones" /clone_lib="NIH_MGC_317" /note="Vector: pCR-XL-TOPO with reversed insert; Clone identification sequence tag: AACGCTGC" gene 1..3866 /gene="BRIP1" /gene_synonym="BACH1" /gene_synonym="FANCJ" /gene_synonym="OF" /db_xref="GeneID:83990" /db_xref="HGNC:HGNC:20473" /db_xref="MIM:605882" CDS 57..3806 /gene="BRIP1" /gene_synonym="BACH1" /gene_synonym="FANCJ" /gene_synonym="OF" /codon_start=1 /product="BRCA1 interacting protein C-terminal helicase 1" /protein_id="AAI01473.1" /db_xref="GeneID:83990" /db_xref="HGNC:HGNC:20473" /db_xref="MIM:605882" /translation="MSSMWSEYTIGGVKIYFPYKAYPSQLAMMNSILRGLNSKQHCLL ESPTGSGKSLALLCSALAWQQSLSGKPADEGVSEKAEVQLSCCCACHSKDFTNNDMNQ GTSRHFNYPSTPPSERNGTSSTCQDSPEKTTLAAKLSAKKQASIYRDENDDFQVEKKR IRPLETTQQIRKRHCFGTEVHNLDAKVDSGKTVKLNSPLEKINSFSPQKPPGHCSRCC CSTKQGNSQESSNTIKKDHTGKSKIPKIYFGTRTHKQIAQITRELRRTAYSGVPMTIL SSRDHTCVHPEVVGNFNRNEKCMELLDGKNGKSCYFYHGVHKISDQHTLQTFQGMCKA WDIEELVSLGKKLKACPYYTARELIQDADIIFCPYNYLLDAQIRESMDLNLKEQVVIL DEAHNIEDCARESASYSVTEVQLRFARDELDSMVNNNIRKKDHEPLRAVCCSLINWLE ANAEYLVERDYESACKIWSGNEMLLTLHKMGITTATFPILQGHFSAVLQKEEKISPIY GKEEAREVPVISASTQIMLKGLFMVLDYLFRQNSRFADDYKIAIQQTYSWTNQIDISD KNGLLVLPKNKKRSRQKTAVHVLNFWCLNPAVAFSDINGKVQTIVLTSGTLSPMKSFS SELGVTFTIQLEANHIIKNSQVWVGTIGSGPKGRNLCATFQNTETFEFQDEVGALLLS VCQTVSQGILCFLPSYKLLEKLKERWLSTGLWHNLELVKTVIVEPQGGEKTNFDELLQ VYYDAIKYKGEKDGALLVAVCRGKVSEGLDFSDDNARAVITIGIPFPNVKDLQVELKR QYNDHHSKLRGLLPGRQWYEIQAYRALNQALGRCIRHRNDWGALILVDDRFRNNPSRY ISGLSKWVRQQIQHHSTFESALESLAEFSKKHQKVLNVSIKDRTNIQDNESTLEVTSL KYSTPPYLLEAASHLSPENFVEDEAKICVQELQCPKIITKNSPLPSSIISRKEKNDPV FLEEAGKAEKIVISRSTSPTFNKQTKRVSWSSFNSLGQYFTGKIPKATPELGSSENSA SSPPRFKTEKMESKTVLPFTDKCESSNLTVNTSFGSCPQSETIISSLKIDATLTRKNH SEHPLCSEEALDPDIELSLVSEEDKQSTSNRDFETEAEDESIYFTPELYDPEDTDEEK NDLAETDRGNRLANNSDCILAKDLFEIRTIKEVDSAREVKAEDCIDTKLNGILHIEES KIDDIDGNVKTTWINELELGKTHEIEIKNFKPSPSKNKGMFPGFK" BASE COUNT 1327 a 715 c 780 g 1044 t ORIGIN 1 cgttgcttcg gtttccctcc agacagttag gaatctgaaa taaacaggaa agcactatgt 61 cttcaatgtg gtctgaatat acaattggtg gggtgaagat ttactttcct tataaagctt 121 acccgtcaca gcttgctatg atgaattcta ttctcagagg attaaacagc aagcaacatt 181 gtttgttgga gagtcccaca ggaagtggaa aaagcttagc cttactttgt tctgctttag 241 catggcaaca atctcttagt gggaaaccag cagatgaggg cgtaagtgaa aaagctgaag 301 tacaattgtc atgttgttgt gcatgccatt caaaggattt tacaaacaat gacatgaacc 361 aaggaacttc acgtcatttc aactatccaa gcacaccacc ttctgaaaga aatggcactt 421 catcaacttg tcaagactcc cctgaaaaaa ccactctggc tgcaaagtta tctgctaaga 481 aacaggcatc catatacaga gatgaaaatg atgattttca agtagagaag aaaagaattc 541 gacccttaga aactacacag cagattagaa aacgtcattg ctttggaaca gaagtacaca 601 atttggatgc aaaagttgat tcaggaaaga ctgtaaaact caactctcca ctggaaaaga 661 taaactcctt ttcgccacag aaaccccctg gccactgttc taggtgctgt tgttctacta 721 aacaaggaaa cagtcaagag tcatcgaata ccattaagaa ggatcataca gggaaatcca 781 agatacccaa aatatatttt gggacacgca cacacaagca gattgctcag attactagag 841 agctccggag gacggcatat tcaggggttc caatgactat tctttccagc agggatcata 901 cttgtgtcca tcctgaggta gtcggtaact tcaacagaaa tgagaagtgc atggaattgc 961 tagatgggaa aaacggaaaa tcctgctatt tttatcatgg agttcataaa attagtgatc 1021 agcacacatt acagactttc caagggatgt gcaaagcctg ggatatagaa gaacttgtca 1081 gcctggggaa gaaactaaag gcctgtccat attacacagc ccgagaacta atacaagatg 1141 ctgacatcat attttgtccc tacaactatc ttctagatgc acaaataagg gaaagtatgg 1201 atttaaatct gaaagaacag gttgtcattt tagatgaagc tcataacatc gaggactgtg 1261 ctcgggaatc agcaagttac agtgtaacag aagttcagct tcggtttgct cgggatgaac 1321 tagatagtat ggtcaacaat aatataagga agaaagatca tgaaccccta cgagctgtgt 1381 gctgtagcct cattaattgg ttagaagcaa acgctgaata tcttgtagaa agagattatg 1441 aatcagcttg taaaatatgg agtggaaatg aaatgctctt aactttacac aaaatgggta 1501 tcaccactgc tacttttccc attttgcagg gacatttttc tgctgttctt caaaaagagg 1561 aaaaaatctc accaatttat ggtaaagagg aggcaagaga agtacctgtt attagtgcat 1621 caactcaaat aatgcttaaa ggacttttta tggtacttga ctatcttttt aggcaaaata 1681 gcagatttgc agatgattat aaaattgcga ttcaacagac ttactcctgg acaaatcaga 1741 ttgatatttc agacaaaaat gggttgttgg ttctaccaaa aaataagaaa cgttcacgac 1801 agaaaactgc agttcatgtg ctaaactttt ggtgcttaaa tccagctgtg gccttttcag 1861 atattaatgg caaagttcag accattgttt tgacatctgg tacattatca ccaatgaaat 1921 ccttttcgtc agaacttggt gttacattta ctatccagct ggaggctaat catatcatta 1981 aaaattcaca ggtttgggtt ggtaccattg ggtcaggccc caagggtcgg aatctctgtg 2041 ctaccttcca gaatactgaa acatttgagt tccaagatga agtgggagca cttttgttat 2101 ctgtgtgcca gactgtgagc caaggaattt tgtgtttctt gccatcttac aagttattag 2161 aaaaattaaa agaacgttgg ctctctactg gtttatggca taatctggag ttggtgaaga 2221 cagtcattgt agaaccacag ggaggagaaa aaacaaattt tgatgaatta ctgcaggtgt 2281 actatgacgc aatcaaatac aaaggagaga aagatggagc tctcctggta gcagtttgtc 2341 gtggtaaagt gagtgagggt ctggatttct cagatgacaa tgcccgtgct gtcataacaa 2401 taggaattcc ttttccaaat gtgaaagatc tacaggttga actaaaacga caatacaatg 2461 accaccattc aaaattgaga ggtcttctac ctggccgtca gtggtatgaa attcaagcat 2521 acagggcctt aaaccaggcc cttggtagat gtattagaca cagaaatgat tggggagctc 2581 ttattctagt ggatgatcgc tttaggaata acccaagtcg ctatatatct ggactttcta 2641 aatgggtacg gcagcagatt cagcaccatt caacctttga aagtgcactg gagtccttgg 2701 ctgaattttc caaaaagcat caaaaagttc ttaatgtatc cataaaggac agaaccaata 2761 tacaggacaa tgagtctaca cttgaagtga cctctttaaa gtacagtacc ccaccttatt 2821 tactggaagc agcaagtcat ctatcaccag aaaattttgt ggaagatgaa gcaaagatat 2881 gtgtccagga actacagtgt cctaaaatta ttaccaaaaa ttcacctcta ccaagtagca 2941 ttatctccag aaaggagaaa aatgatccag tattcctgga agaagcaggg aaagcagaaa 3001 aaattgtgat ttccagatcc acaagcccaa ctttcaacaa acaaacaaag agagttagct 3061 ggtcaagctt taattctttg ggacagtatt ttactggtaa aataccgaag gcaacacctg 3121 agctcgggtc atcagagaat agtgcctcta gtcctccccg tttcaaaaca gagaagatgg 3181 aaagtaaaac tgttttgccc ttcactgata aatgtgaatc ctcaaatctg acagtaaaca 3241 catcgtttgg atcatgccct caatcagaaa ccattatttc atcattaaag attgatgcca 3301 cccttactag aaaaaatcat tctgaacatc cgctctgttc tgaagaagcc ctggatccag 3361 acattgaatt gtctctagta agtgaagaag ataaacagtc cacttcaaat agagattttg 3421 aaacagaagc agaagatgaa tctatctatt ttacacctga actttacgat cctgaagata 3481 cagatgaaga aaaaaatgac ctagctgaaa ctgatagagg aaatagattg gctaacaatt 3541 cagattgcat tttagctaaa gacctttttg aaattagaac tataaaagaa gtagattcag 3601 ccagagaagt gaaagctgag gattgcatag atacaaagtt gaatggaatt ctgcatattg 3661 aagaaagtaa aattgatgac attgatggta atgtaaaaac aacttggata aatgaactgg 3721 aactgggaaa aactcatgaa atagaaataa agaactttaa accatctcct tccaaaaata 3781 aaggcatgtt tcctggtttt aagtaataat acttaactct caagctaagt aaaaatatgt 3841 catcatgctt atgttaaact ctgttg //