LOCUS BC101333 1709 bp mRNA linear HUM 04-OCT-2006
DEFINITION Homo sapiens zinc finger protein 404, mRNA (cDNA clone MGC:120455
IMAGE:40025019), complete cds.
ACCESSION BC101333
VERSION BC101333.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1709)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1709)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (01-AUG-2005) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Baylor Human Genome Sequencing Center
cDNA Library Preparation: Baylor Human Genome Sequencing Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAM Plate: 7 Row: n Column: 17.
FEATURES Location/Qualifiers
source 1..1709
/db_xref="H-InvDB:HIT000336719"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:120455 IMAGE:40025019"
/tissue_type="PCR rescued clones"
/clone_lib="NIH_MGC_282"
/note="Vector: pCR-Blunt II-TOPO; Clone identification
sequence tag: CGCAAG sequenced from the reverse primer"
gene 1..1709
/gene="ZNF404"
/db_xref="GeneID:342908"
/db_xref="HGNC:HGNC:19417"
CDS 1..1659
/gene="ZNF404"
/codon_start=1
/product="zinc finger protein 404"
/protein_id="AAI01334.1"
/db_xref="GeneID:342908"
/db_xref="HGNC:HGNC:19417"
/translation="MARVPLTFSDVAIDFSQEEWEYLNSDQRDLYRDVMLENYTNLVS
LDFNFTTESNKLSSEKRNYEVNAYHQETWKRNKTFNLMRFIFRTDPQYTIEFGRQQRP
KVGCFSQMIFKKHKSLPLHKRNNTREKSYECKEYKKGFRKYLHLTEHLRDHTGVIPYE
CNECGKAFVVFQHFIRHRKIHTDLKPYECNGCEKAFRFYSQLIQHQIIHTGMKPYECK
QCGKAFRRHSHLTEHQKIHVGLKPFECKECGETFRLYRHMCLHQKIHHGVKPYKCKEC
GKAFGHRSSLYQHKKIHSGEKPYKCEQCEKAFVRSYLLVEHQRSHTGEKPHECMECGK
AFSKGSSLLKHKRIHSSEKLYDCKDCGKAFCRGSQLTQHQRIHTGEKPHECKECGKTF
KLHSYLIQHQIIHTDLKPYECKQCGKAFSRVGDLKTHQSIHAGEKPYECKECGKTFRL
NSQLIYHQTIHTGLKPYVCKECKKAFRSISGLSQHKRIHTGEKPYECKECDKAFNRSD
RLTQHETIHTGVKPQKCKECGKAFSHCYQLSQHQRFHHGERLLM"
BASE COUNT 592 a 283 c 347 g 487 t
ORIGIN
1 atggcccggg tgccattgac attcagcgat gttgccatag acttctctca ggaggagtgg
61 gaatatttaa actcggatca gagggatttg tacagagatg tgatgttgga gaattatact
121 aacttggtct cattggactt taatttcaca actgaaagca acaagttatc ttcagaaaaa
181 agaaattatg aagtaaatgc gtaccatcag gagacatgga aaagaaataa aaccttcaac
241 cttatgaggt ttattttcag aactgaccca cagtacacaa ttgaatttgg gagacaacag
301 agacctaaag tgggatgttt tagtcaaatg atattcaaaa aacataaatc ccttcctcta
361 cataagagaa ataacacaag agagaaatca tatgagtgta aggaatataa gaagggcttt
421 agaaaatatt tgcaccttac tgaacatctg agagaccata ctggtgtgat accctatgaa
481 tgtaatgaat gtggaaaagc atttgtagtt ttccagcatt ttattagaca tcgaaaaatc
541 cacactgatt tgaaacccta tgaatgcaat ggatgtgaga aggcctttag gttttattca
601 cagcttattc agcatcagat aattcatact ggtatgaaac cctatgaatg taagcaatgc
661 gggaaggctt ttagacgtca ttctcacctt acagaacatc agaaaattca tgttggcttg
721 aaaccctttg aatgtaagga atgtggggaa acgtttagat tatatcgaca tatgtgtctg
781 catcagaaaa ttcatcatgg tgtgaaaccc tacaaatgta aagaatgtgg aaaggctttt
841 ggtcatcgtt caagtcttta ccaacataag aaaattcatt ctggtgagaa accatataaa
901 tgtgaacaat gtgaaaaggc ctttgttcgc agctatctac ttgttgaaca tcaaagaagt
961 catactggtg agaaacctca tgaatgcatg gaatgtggaa aggcttttag taagggctca
1021 agccttctta aacataagag aattcatagt agtgagaaac tctatgattg taaggattgt
1081 ggaaaggcct tttgtagagg ctctcaactt acacagcatc agagaattca tactggtgag
1141 aagccacatg aatgtaaaga atgtgggaag acttttaagc ttcattcata tcttattcaa
1201 catcagataa ttcatactga tttgaagcca tatgaatgta agcaatgtgg gaaagccttc
1261 agtcgtgttg gagaccttaa gacacatcaa tcaattcatg ctggggagaa accctatgaa
1321 tgtaaggaat gtggaaaaac ctttagactt aattctcaac taatttatca tcagacaatt
1381 catactggtt tgaaacccta tgtatgtaaa gaatgtaaga aggcctttcg ttctatctca
1441 ggtctttctc aacataagag aattcatact ggtgaaaaac cctatgaatg taaagaatgt
1501 gataaggcct ttaatcgcag tgatcgactt actcaacatg agacaattca tactggtgtg
1561 aaaccacaga aatgcaaaga atgtggtaag gcctttagtc attgctatca acttagtcaa
1621 catcaaagat ttcaccatgg tgagagactc ttaatgtaat gagagggaaa gcctttagcc
1681 atggcacatt tttactgttg tcactatta
//